Nitrosopumilus piranensis: NPIRD3C_1003
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Entry
NPIRD3C_1003 CDS
T03656
Symbol
uvrB
Name
(GenBank) uvrABC system exinuclease protein, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
nid
Nitrosopumilus piranensis
Pathway
nid03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NPIRD3C_1003 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nid03400
]
NPIRD3C_1003 (uvrB)
DNA repair and recombination proteins [BR:
nid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NPIRD3C_1003 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NPIRD3C_1003 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
UVR
ResIII
DEAD
AAA_30
UB2H
Met_synt_B12
HEM4
Motif
Other DBs
NCBI-ProteinID:
AJM92215
UniProt:
A0A0C5BYY9
LinkDB
All DBs
Position
840860..842815
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AA seq
651 aa
AA seq
DB search
MLEQTTQFELESEYGPTGDQPQAIDQLVQGVKNKTVQTLLGVTGSGKTFSVANVIARTGK
NTLVISHNKTLAAQLYSELKQFFPKNNVGYFVSYYDYYQPESYLPQTDTYIEKDTQINEK
IEKLRLEATAMLLSGEPTIIVSTVSCIYSLGNPQDWEDLAITVNTGDEIKRNELIRQLID
ARYERNDTEVAPGNFRVKGDTIDITPAYSEDLIRISMFGDEVEKISVLDHVSLKEKKKIN
QMKIFPAKHYLIAKDVRKKAIQSIKDELKKRLPELNELEKQRLEMRTKYDLEMIEELGYC
SGIENYSRHFDGREPGQKAFCLMDFFGDDYLLVIDESHVTLPQLHGMYKGDHSRKKELVT
YGFRLPSAYDNRPLKFEEFEEYIQNTIFVSATPAEYERKISNQIAEQVVRPTGLLDPKVE
IRPTKNQMDDLIQEINKKVANSERVLVTTLTKRMAEDLAEYLSKKQVRVRYMHSEIEGLQ
RTELIRQLRLGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRNFTSLIQTFGRAAR
NENGNVIMYADKITQSMKNAMDETKRRREKQILYNKTHNITPKTIIKSVPEQVTTLDDSK
LKSTHDIATDIIDLEAQMKKYSEDLDFERAIECRDRIKRLEKEIQIKNDRK
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgttggagcaaacaacacaatttgaattggaatctgaatatggccctacaggtgatcag
ccccaagcaattgatcagctagtccaaggtgttaaaaacaagacagttcaaacattgcta
ggagttactggcagtggcaagactttttctgttgcaaatgtaattgcaagaacaggaaaa
aatacacttgtaatttctcacaacaaaacccttgcagcacaactttattcagaactaaaa
caattctttccaaaaaataatgttgggtactttgtttcatactatgactattatcagcct
gaaagctacctgcctcaaactgatacctatattgaaaaagatactcaaataaatgaaaaa
attgaaaaattaagacttgaggctactgcaatgctgctctcaggtgagccaacaataatc
gtgtcaactgtctcttgcatctactctctgggaaaccctcaagattgggaggatttggca
ataactgtaaacactggtgatgaaatcaaaagaaatgaactcatcaggcagttaatagac
gcacgatatgaaagaaatgatactgaagtcgctcctggaaattttagagtaaagggggac
accattgacattacccctgcatattctgaagatttgataagaatttcgatgtttggtgat
gaggttgaaaaaatatctgtactggatcatgtttcattaaaagaaaaaaagaaaattaat
caaatgaaaatttttcctgcaaagcactatcttattgccaaagatgttagaaaaaaggca
atacaatcaattaaagacgaactcaaaaaacgtcttcctgaattaaatgaattagaaaaa
cagcgactagagatgagaacaaaatatgacctggaaatgattgaagaattagggtattgt
tctggtattgaaaattactctagacattttgatggacgagaacctggacaaaaagcattt
tgtttgatggacttttttggagatgactatttgctagtaattgatgaatcccatgtaaca
ttgcctcaattacatggcatgtacaaaggtgatcattcgcgaaaaaaagaattggtaaca
tatggatttagactgccaagcgcatatgataatcgcccattaaaatttgaagaatttgaa
gaatatattcaaaacacaatatttgtttctgctactcctgctgaatatgagagaaaaatc
tcaaatcaaattgctgagcaagttgtcaggcctactggattgttggatccaaaagtcgag
attaggcctacaaaaaaccaaatggatgacttgatccaagaaatcaacaaaaaagtggca
aactctgagcgtgttctagtcacaactttgactaaaagaatggcagaagacttggctgaa
tatctctcaaaaaaacaagttcgagtccgctacatgcactctgaaattgaagggctgcaa
agaaccgaactaatcagacaattacgtcttggggaatttgatgttctagttggaatcaac
ttacttagagagggattagatattcctgaagtctcactggttgcaattttggatgctgac
aaagaaggatttcttagaaactttactagtttaattcaaacttttggtcgagctgcaaga
aatgaaaatggaaatgttatcatgtatgctgataaaattacacaatcaatgaaaaatgca
atggatgaaacaaaacgtcgtagggaaaagcaaattctatacaacaaaactcacaacatt
actccaaagacaattatcaaatctgttccagaacaagtaacaactctagatgattcaaaa
ctaaaatccactcatgacattgcaactgatattattgatttggaggctcaaatgaaaaaa
tattctgaagatttagattttgaacgtgcaattgagtgcagagatagaataaaaagacta
gaaaaggagattcaaataaaaaatgaccgaaaataa
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