Nitrosopumilus piranensis: NPIRD3C_1188
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Entry
NPIRD3C_1188 CDS
T03656
Symbol
phr
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
nid
Nitrosopumilus piranensis
Brite
KEGG Orthology (KO) [BR:
nid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nid03400
]
NPIRD3C_1188 (phr)
Enzymes [BR:
nid01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
NPIRD3C_1188 (phr)
DNA repair and recombination proteins [BR:
nid03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
NPIRD3C_1188 (phr)
Prokaryotic type
NPIRD3C_1188 (phr)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
MGS
Motif
Other DBs
NCBI-ProteinID:
AJM92400
UniProt:
A0A0C5BZH8
LinkDB
All DBs
Position
complement(983885..985282)
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AA seq
465 aa
AA seq
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MSEFSEKTKYKRTLFIFRRDLRKIDNSGLIAASKTSLEVIPAFIIDPLLIKKSNRKFSEF
RMQFLKDCICELNEQLLDSKSHLHIFSGHPKKIILDLITDCKIDAIFVNRDYTPFSKKRD
KEIKRICEENKIDFVIADDILLHDVDTIKTGKGEPYKIFTAFFSKAKELPIRQPQKYNFS
NLSDAKIKSETTIENISELKIKRNSLQQKGGRESCLERLENIKNLVDYDEKRNFPAINGT
SLLSAHNKFGTCSIREIYEVCINTLGPNHTIIRELYWRDFFTYLMHHFQYTFSKEFNKNF
QKIKWHKDKKYFLKWCKGQTGFPIVDAGMRELNQTGFMHNRVRMIVASFLTKDMHIDWRL
GEKYFATKLIDYDPCVNIGNWQWAASTGCDAQPWFRIFNPWIQQKKFDPNCTYIKKWIPE
LKELPAKNIHLLWKSFPKNSSYPKPILEHKSESQKSKEIFKMCTV
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
ttgtcagaatttagtgaaaaaacaaaatacaaaagaacactgttcatattcagacgagat
ctacgaaaaatagataattctggcttaattgcagcctcaaagacatcattagaagtaatt
ccagcgttcatcatagacccattattaatcaaaaaatcaaatagaaagttcagtgaattt
agaatgcaatttcttaaagattgtatatgtgaactcaatgagcaacttttagattcaaaa
tcacatttacatattttttcaggacatccaaaaaaaataattttggatttaataacagat
tgtaaaatagatgcaatttttgtaaacagagactatacaccatttagtaaaaagcgagat
aaagaaattaaaagaatttgtgaagaaaataaaatagattttgtaattgcagatgatata
ctactgcatgacgtagatacaatcaaaacaggtaaaggggaaccatacaaaatttttact
gcatttttttcaaaggcaaaagaattaccaattaggcaaccgcagaaatataatttttca
aatctttcagatgccaaaattaaatctgaaacaaccattgaaaatatttctgaattaaaa
attaaaagaaattcactgcaacagaaaggaggaagagaatcgtgccttgagagactagaa
aatattaaaaatttagtagattatgacgaaaaaagaaattttccagcaataaatggaaca
tcactactttcagcacacaacaaatttggtacttgctccataagagaaatttatgaggtg
tgtattaacacacttggtccaaatcatacaattattagagaactgtattggagagatttt
ttcacatatttaatgcaccattttcaatacacattttcaaaagaatttaacaagaacttt
caaaaaatcaagtggcacaaagataaaaaatattttttaaaatggtgtaaaggacaaaca
ggatttcccatagtagacgcaggaatgagagagcttaatcaaactggatttatgcataac
agagttagaatgattgtagcatcatttctcacaaaagacatgcatattgattggagattg
ggagaaaaatattttgctacaaaactcatcgactatgatccatgtgtcaatataggaaat
tggcaatgggcagcatcaactggatgtgatgctcagccttggttcagaatatttaatcca
tggatacaacaaaaaaaatttgaccccaattgcacatatatcaaaaaatggattcctgaa
ttaaaagaactgccagctaaaaatattcatttactttggaagagttttccaaaaaattct
tcatatccaaaaccaattttggagcacaaatcggaatcacaaaaatcaaaagagattttc
aagatgtgtacagtctaa
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