Nitrosopumilus piranensis: NPIRD3C_1314
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Entry
NPIRD3C_1314 CDS
T03656
Name
(GenBank) Peptide chain release factor 1
KO
K03265
peptide chain release factor subunit 1
Organism
nid
Nitrosopumilus piranensis
Pathway
nid03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nid00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
NPIRD3C_1314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nid03019
]
NPIRD3C_1314
03012 Translation factors [BR:
nid03012
]
NPIRD3C_1314
Messenger RNA biogenesis [BR:
nid03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
NPIRD3C_1314
Translation factors [BR:
nid03012
]
Eukaryotic type
Release factors
NPIRD3C_1314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_1
eRF1_3
acVLRF1
baeRF_family10
Motif
Other DBs
NCBI-ProteinID:
AJM92526
UniProt:
A0A0C5BW96
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Position
complement(1071642..1072937)
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AA seq
431 aa
AA seq
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MEKAQMGKIKIEKQDSVKIYKIRKTLEELSKKSGRGTELITVYIPKGKQLHEIIGTLQQE
QGTADNIKSDLTRSHVVDSLGKVVQRLKLYKKTPERGLVMFCGALPPEEGGPLGSEVVKV
WEIDPPKDLNQYLYRCDDHFHVDILKDMLKDDNLIGFLAIDAKDAGWGLLHGDKIEVLAQ
TGSGVAGKHRQGGQSAKRFQKLREMELTYYFNRVAQTTREYFIDIYPVKGLVISGPGPTK
EDFINGNYLEYRLQNNIIATIDSSYSGSEGIREAFAKSSDILGNFRLVEEKKLVEDLFRE
INGNTGKGSYGLKEVIEFLKNNVVETLIITDNTNLHRVEGKCKRCQHMQEEIVERPQVIP
KKTEYSNNPCPGCKAMEVEVNEQDIVDYLELLSSKTGSKLEVVSGSAEHGNMLASLGKIG
AILRYNPGHAK
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
ttggagaaagcacaaatgggcaaaataaagatagaaaaacaagattctgttaaaatctat
aaaattagaaaaacattggaagagttatcaaaaaagtctggtcgcggaacagaactaatc
acagtatacattcccaaaggaaagcaacttcatgagattattggaacacttcaacaagaa
caaggtacagcagacaatatcaaatcagatcttactagaagtcatgttgtagattctttg
gggaaagtagttcagagattaaaactctacaaaaaaacacctgaaagaggattagtgatg
ttttgtggagcgttacctccagaagaaggcggtccattaggaagcgaagttgtcaaagtt
tgggagatagacccaccaaaagatttgaatcaatatctgtacagatgtgatgaccatttc
catgtcgacattttaaaagacatgctcaaggatgacaatctgattgggtttttagcaatt
gatgcaaaagatgcaggttggggattgctacatggggacaaaattgaagtacttgcccaa
acaggttcaggagttgcaggaaaacatagacaaggaggacaatctgcaaagaggtttcaa
aaattaagagaaatggagctgacatattattttaacagagtagcacaaacaacaagagaa
tattttattgatatctatccagtaaagggacttgtcatttcaggtccaggacctacaaaa
gaagattttatcaatggaaattatctagaatatcgattacaaaacaacatcattgcaaca
attgattcatcatattcagggtcagaaggaattagagaagcatttgcaaagtcttcagat
attttgggaaactttagactagttgaagaaaaaaaactagttgaagacttgttcagagag
attaacggaaatactggaaaaggatcatatggattaaaagaagtaatcgagtttctaaaa
aataacgtagtagaaaccttgatcattacagataatacaaatttgcatagagtagaagga
aaatgtaaacgctgtcaacacatgcaagaagaaattgttgaaaggccacaagtaatccca
aaaaagacagagtattctaacaacccatgtcctggatgtaaagccatggaagtggaggta
aacgaacaagatattgtagactatctagaattactttcatcaaagacaggttcaaaatta
gaagtggtgtcaggaagtgcagaacacggaaatatgcttgcaagtcttggaaaaattggc
gcgattttaagatacaacccagggcacgctaaataa
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