Nitrosopumilus piranensis: NPIRD3C_1543
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Entry
NPIRD3C_1543 CDS
T03656
Symbol
fen
Name
(GenBank) Flap endonuclease 1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
nid
Nitrosopumilus piranensis
Pathway
nid03030
DNA replication
nid03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NPIRD3C_1543 (fen)
03410 Base excision repair
NPIRD3C_1543 (fen)
03450 Non-homologous end-joining
NPIRD3C_1543 (fen)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nid03032
]
NPIRD3C_1543 (fen)
03400 DNA repair and recombination proteins [BR:
nid03400
]
NPIRD3C_1543 (fen)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nid04147
]
NPIRD3C_1543 (fen)
DNA replication proteins [BR:
nid03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
NPIRD3C_1543 (fen)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
NPIRD3C_1543 (fen)
DNA repair and recombination proteins [BR:
nid03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
NPIRD3C_1543 (fen)
Exosome [BR:
nid04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NPIRD3C_1543 (fen)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
AJM92755
UniProt:
A0A0C5C0A1
LinkDB
All DBs
Position
1220993..1222015
Genome browser
AA seq
340 aa
AA seq
DB search
MGLNLKDLVVREKTTLEAFSNKVIAIDAYNAIYQFLASIRGPDGLQLSDAEGRITSHLSG
LLYRNVNFLSLGIKPVYVFDGKPPSLKTAEIERRKQIKMDATIKYEKAIADGNLEDARKY
AQQTTSMKDGMVKESKQLLTYFGIPYIEAPSEGEATAAHLTNTGQAYASASQDFDSILCG
AKRLVRNFTNSGRRKIPNKNTYIDIVPEIIETQKTLESLELTREELIDVGILIGTDFNPN
GFERIGPKTALKMIKQHSRLEDIPQIQEQLQEIDFQQIREIFLNPEVAEIDEIIFNDIDY
EGITNYLVKERSFSEDRVNSTLNRLKKALEKKSQNLDQWF
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgggcttaaatctaaaagacttggttgtaagggagaaaacaactcttgaagcattttca
aataaagtaattgcaattgatgcgtacaatgcaatctatcagtttttagcaagcattaga
ggtccagatggattacaactatcagatgcagaaggcaggattacaagtcatcttagcggt
cttctttatagaaatgtgaatttcctatctttaggaataaaaccagtatacgtatttgat
ggaaagcccccatccttaaaaactgcggaaatcgagcgtagaaaacaaatcaaaatggat
gccacaataaaatatgaaaaagccattgcagatggaaacctagaagatgccagaaaatat
gctcagcaaactaccagtatgaaagatggtatggtaaaagaatcaaaacaacttctaaca
tattttggcataccatacattgaagccccatcagaaggagaagcaactgcagctcatctt
acaaacactggtcaagcatacgcctctgcaagtcaagattttgattcaattttatgtggc
gcaaaaagacttgttaggaattttacaaatagcggaagaaggaaaataccaaacaaaaac
acatacatcgacatcgttccagaaattattgaaacacagaaaacactagaatcattagaa
ttaacacgagaagaacttatagatgtaggaattttaattggaactgattttaatccaaac
ggttttgaacgaatcggtccaaagacagcactaaagatgatcaaacaacattcaagatta
gaagacatacctcaaattcaagaacagttacaagaaatcgattttcaacaaattcgagaa
atatttttgaatccagaagttgcagagatagatgaaattatttttaacgacatagactat
gagggaataactaattatcttgtaaaggaacgaagtttttctgaagacagagtcaactct
acattaaacagattaaaaaaagcattagagaaaaaaagtcaaaacttagatcagtggttt
taa
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