Nitrosopumilus piranensis: NPIRD3C_1831
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Entry
NPIRD3C_1831 CDS
T03656
Symbol
vsr
Name
(GenBank) HpaII very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
nid
Nitrosopumilus piranensis
Brite
KEGG Orthology (KO) [BR:
nid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nid03400
]
NPIRD3C_1831 (vsr)
DNA repair and recombination proteins [BR:
nid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
NPIRD3C_1831 (vsr)
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Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
DUF559
Motif
Other DBs
NCBI-ProteinID:
AJM93041
UniProt:
A0A0C5BXM7
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All DBs
Position
1447001..1447402
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AA seq
133 aa
AA seq
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MPDKFSKQTRSRIMSSIRSKNTKPELQVRKLVWALGKRFRIHDRTVFGTPDISNKSKRVA
VFIDGCFWHGCPRCYSEPKSNTEFWRNKIARNRDRRKKVKSELRKEGWTVMEFWEHAVRK
EPIPIAISISEKI
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
ttgccagacaagttctcaaagcaaacacgaagtcgcataatgtcatcaatcaggtcgaag
aacacaaaaccagaactgcaagtaagaaaacttgtgtgggcacttggcaagagattcagg
attcatgacaggacagtttttggaacacctgacatctcaaacaagtctaagagagttgca
gtgttcattgacggatgcttctggcacggatgcccaagatgctattctgagccaaagtca
aacactgaattctggagaaacaagattgcaagaaacagggacaggcgaaagaaggtaaaa
tcagagcttagaaaagagggctggactgtcatggagttctgggagcatgcagtaagaaag
gagcctattccaatcgcaatttctatctcagagaaaatttga
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