Nitrosopumilus piranensis: NPIRD3C_1932
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Entry
NPIRD3C_1932 CDS
T03656
Name
(GenBank) Shwachman-Bodian-Diamond syndrome protein
KO
K14574
ribosome maturation protein SDO1
Organism
nid
Nitrosopumilus piranensis
Pathway
nid03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nid00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
NPIRD3C_1932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nid03009
]
NPIRD3C_1932
Ribosome biogenesis [BR:
nid03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
NPIRD3C_1932
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
EFG_C
Motif
Other DBs
NCBI-ProteinID:
AJM93142
UniProt:
A0A0C5CD58
LinkDB
All DBs
Position
complement(1516261..1516947)
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AA seq
228 aa
AA seq
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MADVTVARFSFEGEKFEILVKPDPALEYKLGKKKDISAILVSDEIYTDSGKGTKPSTEKL
LKAFKTEDQAEIAKIIMQKGDLNLTTDQRRKMIEDKKKQIVSYIAKTYVDPKTHLPHPPL
RVEQAMKDGRVSVDPQKSVDEQVKDIVEKLRSIIALKSENLQLEIIIPAQYASQSYAVLK
SVGSLKKEEWQNNGSLKAILEIPAAARPNVIDRLGSITKGSASVEVMQ
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgtaacagttgcaagattctcttttgaaggagagaagtttgagatattggta
aaaccagaccctgcactagagtacaagcttgggaagaagaaagatatttctgcaattttg
gtttcagatgaaatctacactgattcaggaaagggaacaaagccttcaactgaaaaacta
ctcaaagctttcaagactgaagatcaggcagagattgctaagataattatgcagaaaggt
gatcttaaccttacaactgatcaaagacgaaaaatgattgaagacaagaaaaaacagatt
gtatcatacattgcaaagacctatgtcgatcctaaaactcacttgcctcatcctcctctg
agagttgagcaagcaatgaaagatggacgagtttcagttgatccacaaaaaagcgttgat
gaacaagtaaaagatattgtagaaaaactccgttcaataattgcactaaaatctgaaaat
ttgcaattagagattatcatcccagcacaatatgcttcgcaatcatatgccgttctaaaa
tcagtaggttctctgaaaaaagaagaatggcaaaataatggttctctaaaagcaatactt
gaaatacccgctgcagcaaggccaaacgtgatagacagattaggttctataaccaaaggc
tctgcttcagttgaggtaatgcagtaa
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