Nitrosopumilus piranensis: NPIRD3C_1960
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Entry
NPIRD3C_1960 CDS
T03656
Symbol
truB
Name
(GenBank) putative tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
nid
Nitrosopumilus piranensis
Brite
KEGG Orthology (KO) [BR:
nid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nid03016
]
NPIRD3C_1960 (truB)
Enzymes [BR:
nid01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NPIRD3C_1960 (truB)
Transfer RNA biogenesis [BR:
nid03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NPIRD3C_1960 (truB)
Prokaryotic type
NPIRD3C_1960 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
DKCLD
Pus10_C
DUF7344
Motif
Other DBs
NCBI-ProteinID:
AJM93170
UniProt:
A0A0C5C1D9
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All DBs
Position
complement(1540362..1541360)
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AA seq
332 aa
AA seq
DB search
MTLKQLENLIEVDQDITDDAYGTYYDKRTIEQLLNYGIIILDKPPGPTSHETVAWTKRIL
KLPKIGHSGTLDPQVSGVLPLGLGEATKALGVLLFGPKEYHALGRVHSLPSKEKLHEIVE
SLTGEIYQKPPQRSAVVRQTRTRTIYEFEVLEQKERLLLTRVLCEAGTYIRKLYYDLGEI
LGPGATMIELRRTRVDQFRETDGLVTLHELANAFALWEEKKDDAKLKSMIKPVELALSEL
KSIVIRDSAVDAMCHGAQLAIPGILKISPNLKKGDIVGIYTQKGEAVALAESTMSEEEIR
DATKGYAFETRRIIMAPNTYPKKWRTKPSSKE
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgactctaaagcaactagagaatctaatcgaagttgatcaagacattactgatgatgca
tacggcacatactatgacaaaagaacaatcgagcaactactaaactatggaataattatt
ttagacaaacctcctggtcctacaagccatgagactgtagcttggacaaagagaatctta
aagctgccaaagattggacatagcggaacactagaccctcaagtatctggagttttaccg
ctaggtcttggtgaggcaactaaagcattaggagtacttctctttggaccaaaagagtat
catgcactaggacgtgtccactcccttccatcaaaagaaaaactacatgagattgtagag
tcactaactggggagatttaccaaaaacctccacagcgctcagcagtagtcagacaaaca
aggacaagaacaatttatgaatttgaagtattagaacaaaaagagagattactactaact
cgagtcttgtgtgaggcaggaacctacatcagaaaactgtactatgacctaggtgagatt
ttgggacctggtgcaactatgattgagcttagaagaactagagttgatcagttcagagag
actgatggactggtaactttgcatgaattagcaaatgcatttgcattgtgggaagaaaaa
aaagatgatgctaaactcaagagcatgataaagcccgtagagcttgcactaagtgaatta
aaatcaatagtgattcgtgattctgcagtagatgcaatgtgtcatggcgcacaacttgca
attccaggaattttgaagatatctccaaatttgaagaaaggtgacattgttggaatctat
actcaaaaaggtgaagcagtagcactggcagaatccacaatgagtgaagaagagattcgt
gatgcaacaaagggctatgcatttgagacaaggagaatcataatggccccaaacacatat
cctaaaaaatggagaacaaaaccttcttctaaagaataa
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