Nocardia iowensis: KV110_02455
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Entry
KV110_02455 CDS
T07470
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nie
Nocardia iowensis
Brite
KEGG Orthology (KO) [BR:
nie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nie03032
]
KV110_02455 (topA)
03400 DNA repair and recombination proteins [BR:
nie03400
]
KV110_02455 (topA)
Enzymes [BR:
nie01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KV110_02455 (topA)
DNA replication proteins [BR:
nie03032
]
Prokaryotic type
DNA Topoisomerases
KV110_02455 (topA)
DNA repair and recombination proteins [BR:
nie03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KV110_02455 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QXN95281
LinkDB
All DBs
Position
512293..515145
Genome browser
AA seq
950 aa
AA seq
DB search
MIVESPTKARKIAPYLGHDYTVEASVGHIRDLPRGAADVPAKYKGESWARLGVDVDHDFE
AIYVVSPDKKAKVAELKSLLKDADELYLATDPDREGEAIAWHLLETLKPKVPVRRMVFHE
ITEPAIQAAAADTRDLDNDLVDAQETRRILDRLYGYEVSPVLWKKVMPRLSAGRVQSVAT
RVIVQRERERMAFRSAEYWDIAAKLDAGPGEDGDTSNPRTFGARLVNVAGARVATGRDFG
SDGQLKTASGVVVLDEAYAHRLAQALDGADLVVSSAEAKPYTRKPYPPFMTSTLQQEAGR
KLRFNSERTMRVAQRLYENGYITYMRTDSTTLSESAIAAARSQATQLYGAEYVHPSPRQY
TRKVKNAQEAHEAIRPAGDTFATPGQLHARLDNDEFRLYEMIWQRTVASQMADARGTTLT
LRITGVAATGEECVFSASGRTITFAGFLKAYVESVDEEAGGQSDDAESRLPALDEGQGVT
AVELNPDGHSTNPPARYTEASLIKTLEELGIGRPSTYSSIIKTILDRGYVYKRGSALVPS
WVAFAVIGLLEEHFGRLVDFDFTAGMEDDLDAIAGGREQRGSWLSSFYFGGDKGAEGSVA
RSGGLKKMVGERLDDIDAREINSIKLFADEEGRDVVVRVGRYGPYLERMVSNPDDPEGNS
VSQRANLPDDLPPDELTPEVAEKLFSTPQEGRSLGIDPATGHEIVAKEGRFGPYVTEVLP
EPAAEETSAPAKKTAKKATAPKPRTGSLFKSMDLATVTLDDALKLLSLPRVVGADPASGE
EITAQNGRYGPYLKKGTDSRSLTSEDQIFDVTLEEALKIYAEPKRRGRQASAAAPLRELG
NDSASGQPMVIKDGRFGPYVTDGETNATLRKGDEIESITPERAMELLADRRARGPVKKKA
AAKKAPAKKTAAKKTAAKKATATKSTTTKTVAKKTAAKKAAAKKTGVGKS
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgtcgagtccccaaccaaggcccgcaagatagccccttatctcggccatgactac
acggtcgaggcctcggtggggcatatccgggacctgccgcgtggtgcggcggatgttccc
gccaaatacaagggtgagtcctgggcgcgcctcggcgtcgacgtggaccacgacttcgag
gccatctatgtggtgagcccagataaaaaggccaaggtcgccgagctcaagagcttgctg
aaggacgccgacgagctctatctcgccaccgaccccgaccgcgagggcgaggccatcgcc
tggcacttgctggagacgctcaagcccaaggtcccggtccggcggatggtgttccacgag
atcaccgagcccgccatccaggcggccgccgccgacacacgggatctcgacaacgacctg
gtcgatgcgcaggagacccgccgcattctggaccggctgtacggctacgaggtcagtccg
gtcttgtggaagaaggtcatgccgcgtttgtcggcgggccgggtgcagtcggtcgccacc
cgggtgatcgtccagcgcgagcgcgagcggatggcgttccggtccgccgaatactgggac
atcgccgcgaaactcgacgcgggaccgggtgaagacggcgacaccagcaacccgcggacc
ttcggagcgcggttggtgaacgtcgccggtgcgcgcgtcgcgaccggtcgtgacttcggc
tcggacggtcagctcaagaccgcctccggtgtggtcgtgctggacgaggcctacgcgcac
cgcttggcccaggccctggacggagccgacctggtggtctcctccgcggaggccaagccg
tacacccgcaagccgtacccgccgttcatgacctcgacgctgcagcaggaagcggggcgc
aagctgcgcttcaactccgagcgcacgatgcgggtcgcgcagcggctgtacgaaaacggc
tacatcacctacatgcgtaccgactcgaccacgctgtcggagtcggcgatcgccgcggcc
cggtcgcaggcgacccagctgtacggcgccgaatacgtgcaccccagcccgcgccaatac
acccgcaaggtgaagaacgcgcaggaggcacacgaggcgatccgcccggcgggcgacacc
ttcgccacccccggccagttgcacgcgcggctggacaacgacgagttccgcctctacgaa
atgatctggcagcgcacggtcgcctcgcagatggccgacgccaggggcaccacgctgacc
ctgcggatcaccggcgtcgcggccaccggcgaggaatgcgtgttctccgcctcgggccgc
accattactttcgccggcttcctcaaggcctacgtggagagcgtggacgaggaggcgggc
ggccaatccgacgacgccgaatcccggctgcccgccctcgacgagggccagggcgtcacc
gcggtcgagctgaatcccgatgggcacagcacgaatccgcccgccagatacaccgaagcc
tcgctcatcaagacgctcgaagagctcggcatcggccgtccttcgacgtactcgtcgatc
atcaagacgattctcgaccgcggctacgtgtacaagcgcggcagcgcgctggtgccgtcg
tgggtggcgttcgccgtaatcggtttgctggaagagcatttcggccgattggtcgacttc
gacttcaccgcgggcatggaggacgacctcgacgccatcgcgggcgggcgcgagcagcgc
ggaagctggttgtccagcttctatttcggcggcgacaagggcgccgagggttcggttgcc
cggtccggcggactgaagaagatggtcggcgagcggctcgacgacatcgacgcgcgagaa
atcaactccatcaagctctttgccgacgaggagggacgcgacgtcgtcgtccgggtcggc
cggtacgggccgtacctggagcggatggtctcgaatcctgatgaccccgaaggcaattcg
gtgtcgcagcgggccaacctacccgacgatctgccgccggacgagctgacccccgaggtc
gccgagaagctgttctccaccccgcaggagggacgttcgctgggcatcgacccggcaacc
gggcacgaaatcgtcgccaaggaaggacgtttcggcccctacgtcaccgaggtgctgccc
gagcccgccgccgaggaaacgtcggcaccggccaagaagaccgcgaagaaggcgaccgcg
cccaaaccgcgcaccgggtcgctgttcaagtcgatggacctggcgaccgtcaccctcgac
gacgcgctcaagctgctgtcgttgccgcgggtggtcggcgccgacccggcttccggcgag
gagatcaccgcgcagaacgggcgatacggcccatacctgaagaagggcaccgattctcgg
tcgctcaccagcgaggaccagatcttcgacgtgacgctcgaagaggcgctcaagatctac
gcggagccgaagcggcgcgggcggcaggcgtccgccgcggcgccgttgcgtgagttgggc
aacgactcggcctccggtcagccgatggtgatcaaggacggtcgcttcggtccgtacgtc
accgacggcgagaccaatgccacgctgcgcaagggtgacgagatcgagtccatcaccccg
gagcgggcgatggaactgctcgcggaccggcgggcacgcgggccggtgaagaagaaggcc
gccgccaagaaggctcccgcgaagaagaccgctgccaagaagaccgccgccaagaaggcg
acggccaccaaatccacgaccaccaagacggtcgccaagaagaccgccgcgaagaaggcg
gcggccaagaaaacgggcgtcgggaaatcctga
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