Nocardia iowensis: KV110_09745
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Entry
KV110_09745 CDS
T07470
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
nie
Nocardia iowensis
Pathway
nie03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nie00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KV110_09745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nie03019
]
KV110_09745
03400 DNA repair and recombination proteins [BR:
nie03400
]
KV110_09745
Enzymes [BR:
nie01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KV110_09745
Messenger RNA biogenesis [BR:
nie03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KV110_09745
DNA repair and recombination proteins [BR:
nie03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KV110_09745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_30
AAA_22
Pribosyltran
Motif
Other DBs
NCBI-ProteinID:
QXN93337
LinkDB
All DBs
Position
complement(2147457..2149580)
Genome browser
AA seq
707 aa
AA seq
DB search
MTTATDVPAIDLTAPDLRDRAEHLLRELAGPDARLREDQWTAIEALVVQRRRALVVQRTG
WGKSAVYFIAAKLLRGAGRGPTVIVSPLLALMRNQVAAAQRAGVVAATINSGNMTEWDEI
HTQVASGEVDVLLVSPERLNNPDFRDQVLPKLAADAGLVVIDEAHCVSDWGHDFRPDYRR
IRTLIADLGSDVPVLATTATANDRVVTDVATQIGTDTLVLRGTLDRESLHLSVVRFDDAV
ERTAWLSKHLHTLTGSGIVYTLTVAAAHDLADVLNSHGHTVAAYTGQTDPAEREALESAL
LNNEVKALIATSALGMGFDKPDLGFVVHVGAPSSPIAYYQQVGRAGRGTDRAEVVLLPGP
EDARIWSYFASVAFPREHIVRSVLDALDTDRALSTAALEPLVELNRSRLEMVLKVLDVDG
AVRRVRGGWISTGQPWIYDTERYERLSAAREVEQQAMVDYQSTTSCRMEFLRRQLDDPGL
TAEQSDSPGCGRCDNCTGTRPDVTVDADAIAATRARLDRPGLDLSPRKQWPTGMAKLGVP
LSGKITNGAETGRVLGRLTDLGWGQRLRTLLDGPDDPIPDAVFDACIAVLRDWDWATRPT
SVMALESPRYPVLTATLAARLAEVGRLTDLGTLQTRPDRPPVSAANSAHRVAGLFDSWEV
PDLTDVEGPILLVDALSDTGWTLTLAAHALRTAGADGVLPFALASVT
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgaccacggcgaccgatgtcccggcgatcgacctcaccgcacccgaccttcgcgaccgc
gcggaacatttgctgcgcgaactggccggacccgatgcccggctacgggaggatcagtgg
acggcgatcgaggcgctggtggtgcaacggcgccgagcgctggtcgtgcagcgcaccggc
tggggtaagtcggcggtctacttcatcgccgccaagttgctgcgcggggccgggcgcggg
ccgacggtgatcgtgtcgccgctgctcgcgttgatgcgcaaccaggtcgccgccgcacaa
cgcgcgggagtggttgccgcgaccatcaattcgggcaatatgaccgaatgggacgagatc
cacacccaggtcgcgtcgggcgaggtcgacgtgttgctggtcagcccggagcggctgaac
aatccggacttccgcgaccaggtgctgccgaaactcgccgccgacgcgggcctcgtggtg
atcgatgaggcgcactgcgtctccgactggggccacgacttccggcccgactaccggcgc
atccgcacgctgatcgccgatctcggctcggacgtgccggtgctggccaccacggcgacc
gcgaacgaccgggtggtcaccgacgtcgccacccagatcggcaccgacaccctggtgctg
cgcggcacgctggaccgcgagtcgctgcacctgtcggtggtgcgcttcgacgacgcggtg
gaacgcaccgcctggctcagcaagcacctgcacacgctgaccgggtccggcatcgtctac
acgctcaccgtcgcggccgcgcacgacttggccgacgtgctgaattcgcatgggcacacc
gtcgccgcctacaccggtcagaccgacccggccgaacgcgaggcgctggagtcggcgctg
ctgaacaacgaggtgaaggcgctcatcgccacctcggcgctgggcatgggtttcgacaag
cccgatctcggcttcgtcgtgcatgtcggcgcgccgtcctcgcccatcgcctactaccaa
caggtcggtcgtgcgggtcgtggcaccgaccgcgccgaggtggtgctgctgcccggcccc
gaggacgcgcggatctggagttactttgcctccgttgcctttccacgcgaacacatcgtg
cgctcggtactcgatgcgctggacaccgaccgggcactgtccacggccgcactcgaacca
cttgtcgaactgaaccgctcccggttggagatggtgctcaaggtgctcgacgtggacgga
gcggtgcgccgggtgcgcggcggctggatttccaccggccagccgtggatctatgacacc
gaacggtacgaacggttgtccgcggcccgcgaggtcgagcagcaggcgatggtcgattac
cagtcgaccaccagctgccggatggagttcctgcgccgtcagctcgacgacccgggattg
actgcggaacaatcggattcgcccggctgcggtcgctgcgacaactgcaccggcactcgg
ccggatgtcacggtcgacgccgacgccatcgccgccacccgggcccgtctcgaccgtccc
ggcctcgacctgagtccgcgcaagcaatggcctaccggcatggcgaagctcggcgttccg
ctgtccggcaagatcaccaacggcgccgagaccggtcgggtcctcggcaggcttaccgac
ctcggctggggccaacgcttgcgcaccctgctcgacgggccggacgatccgatccccgat
gcggtcttcgatgcgtgcatcgctgtgctgcgcgactgggattgggccactcgcccgacg
tcggtcatggccctcgaatccccgcgttacccggtgctgaccgccaccttggccgctcgc
ctcgccgaggtcggtcggctcaccgacctgggcacgctgcaaacgcgtccggaccgcccg
ccggtttccgccgccaattccgcacaccgcgtcgcgggcctgttcgactcatgggaagtc
cccgacctcaccgatgtcgagggcccgatcctgttggtggacgccctttccgacaccggc
tggaccctcaccctcgccgcccacgccctgcgcaccgcgggcgccgacggggtgctgccg
ttcgcgctcgcgtccgtcacctag
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