Nocardia iowensis: KV110_27410
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Entry
KV110_27410 CDS
T07470
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
nie
Nocardia iowensis
Brite
KEGG Orthology (KO) [BR:
nie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nie03021
]
KV110_27410
Transcription machinery [BR:
nie03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KV110_27410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
MarR_2
KORA
MarR
HTH_3
HTH_Tnp_ISL3
GerE
HTH_Crp_2
Sigma70_ECF
HTH_10
HTH_24
DUF7343
E3_binding
DUF134
Motif
Other DBs
NCBI-ProteinID:
QXN95798
LinkDB
All DBs
Position
5965502..5966311
Genome browser
AA seq
269 aa
AA seq
DB search
MSTEDAVEESEALEAVKTVPGYDDVGLLFEQLGASKPGTARHSALRAELISRCIPLADHI
ARKFSGRGEPFDDLTQVARVGLVHAVDRFDVERGSNFLSFAVPTIMGEVRRYFRDNTWAM
RVPRRVKETHLRIGAAIDALSQRLGRSPTAKEIAAELDVDPDEVTQAVIAGNAYQPSSID
AATLGRDTDASLLDTLGEEETQFDRVEEYVAIRPLLAGLPERERRILTMRFFESMTQTQI
AQQMGISQMHVSRILAKTLARLREQSSRE
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgaccgaggatgccgtcgaggaaagcgaagctctcgaagccgtcaagacggtccct
ggttacgacgatgtggggttgcttttcgaacagctcggcgccagcaaaccgggcacggcg
cggcacagcgcgttacgtgccgagttgatcagccgctgcatcccgctcgccgaccacatc
gcgcgcaagttcagcgggcgcggcgagcccttcgacgatctaacccaggtggccagggtc
ggactggtgcacgcggtcgaccgtttcgatgtcgaacgcggctccaacttcctgtccttc
gcggtaccgaccatcatgggcgaggttcgtcgctacttccgcgacaacacctgggccatg
cgcgttccgcgccgggtcaaggagacccatctgcgcatcggtgcggcgatcgacgcactc
tcgcagcgcctcggccggtcgccgaccgccaaggagatcgccgccgaactcgacgtggac
ccggacgaggtgacccaggccgtcatcgcgggcaacgcctaccagccgagctccatcgac
gcggccaccctcggccgcgacaccgacgcctcactgctggacaccctcggtgaggaagag
acccaattcgaccgtgtcgaagagtatgtcgcgatccggccgctgctggccgggctgccc
gagcgcgaacgccgcatcctcaccatgcggttcttcgaatcgatgacgcagacccagatc
gcccagcagatgggcatttcgcagatgcacgtctcgcgcattctcgcgaaaacccttgcc
cggcttcgcgagcagtccagtcgggagtaa
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