Nocardia iowensis: KV110_28310
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Entry
KV110_28310 CDS
T07470
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
nie
Nocardia iowensis
Brite
KEGG Orthology (KO) [BR:
nie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nie03032
]
KV110_28310 (gyrB)
03400 DNA repair and recombination proteins [BR:
nie03400
]
KV110_28310 (gyrB)
Enzymes [BR:
nie01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KV110_28310 (gyrB)
DNA replication proteins [BR:
nie03032
]
Prokaryotic type
DNA Topoisomerases
KV110_28310 (gyrB)
DNA repair and recombination proteins [BR:
nie03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KV110_28310 (gyrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
QXN89404
UniProt:
A0ABX8RKG3
LinkDB
All DBs
Position
complement(6153850..6155895)
Genome browser
AA seq
681 aa
AA seq
DB search
MAATKTSGSSRAKTRKQDYGASSIAVLEGLEAVRKRPGMYIGSTGERGLHHMVREIVDNS
VDEAMAGYATRVDVTLLADGGVEVADDGRGIPVEMHDQGIPTVEVVMTQLHAGGKFDSDT
YAVAGGLHGVGLSVVNFLSTRIELEIDRDGYHWTQNYLNAKPEELVRGAPTERTGNTTRF
WPDPQIFETTTFNFETVARRLQEMAFLNKGLTITLTDERVTDAEITDDVVSETAEAPKHA
EDGNAAPVEHKVKTRTYHYPGGLEDFVRHINRTKQPIHNSVVGFTGKGTGHELEVAMQWN
SGYSESVHTFANTINTHEGGTHEEGFRAALTTVVNKYAKDKKLLKEKDGNLTGDDIREGL
AAIVSVKVSEPQFEGQTKTKLGNTEVKSFVQKACNEHLSHWFEANPADAKTIVNKAVSSA
QARVAARKARELVRRKSATDLGGLPGKLADCRSKDPSRSEIYIVEGDSAGGSAKSGRDSM
YQAILPLRGKIINVEKARIDRVLKNNEVQSIITAFGTGIHDEFDIAKLRYHKIVLMADAD
VDGQHIATLLLTLLFRFMRPLVEQGHVYLAQPPLYKLKWQRSDPEFAYSDRERDTMLTEG
LAAGKKINSDDGVQRYKGLGEMNPKELWETTMDPSVRVLRQVTLDDAAAADELFSVLMGE
DVGARRGFITRNAKDVRFLDV
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
gtggctgccaccaaaaccagcggatcgagcagggcgaaaacgcgaaagcaggattacggg
gcctcgtccatcgcggtcctcgaagggctcgaggcggtccgtaagcgtcccggcatgtac
atcggttccaccggtgagcgcggtctgcaccatatggtgcgcgagatcgtcgacaactcc
gtcgacgaggcgatggccgggtacgccacccgggtcgatgtcacattgctcgcagacggt
ggcgtcgaagtagccgacgacggccgagggattccggtcgagatgcacgaccaggggata
cccacggtcgaggtggtcatgacgcagctgcacgcaggcggcaagttcgactccgatacc
tacgcggtggccggtggtctacacggggtgggtctgtcggtggtgaacttcttgtcgacc
cggatcgagctggagatcgaccgcgacggctaccactggacgcagaactatctcaatgcc
aagcccgaggaactggtgcgcggtgcaccgaccgagcgaaccggcaatacgacgcggttc
tggccggatccgcagatcttcgagacgacaacgttcaacttcgagaccgtggcccgccgg
ttgcaggagatggcgttcctgaacaagggcctgaccatcaccttgaccgacgagcgggtc
accgacgccgagatcaccgatgatgtggtcagtgagaccgccgaggcgcccaagcacgcc
gaggacggcaacgccgcaccggtcgagcacaaggtcaagacccggacctaccactatcca
ggtggtctggaggattttgtgcgtcatatcaatcggaccaagcagccgattcataattcg
gtggtggggttcaccggtaagggcaccgggcatgagctcgaggtggcgatgcagtggaac
tcggggtattcggagtcggtgcataccttcgccaacacgatcaacactcatgagggcggc
acccatgaggaggggtttcgggcggcgttgaccacggtggtcaacaagtacgccaaggac
aagaagctgctcaaggaaaaagacggcaacctcaccggtgatgacatccgtgagggtttg
gccgcgattgtgagtgtgaaggtttccgagccgcagttcgagggccagaccaagaccaag
ttgggtaataccgaggtcaagtcgtttgtgcagaaggcgtgtaacgagcatctgtcgcat
tggttcgaagccaaccccgccgatgccaagacgatcgtgaacaaggcggtgtcctcggcg
caggcgcgggtggccgcgcgtaaggcgcgggagttggtgcggcgtaagtcggcgacggat
ctgggtgggttgccgggtaagttggctgattgccggtccaaggatccgagtcggtccgag
atctacatcgtcgagggtgattcggctggtgggtcggccaagtccgggcgtgattcgatg
tatcaggcgatcttgccgttgcggggaaagatcatcaacgtcgagaaggctcgtatcgat
cgggtgttgaagaacaacgaggtgcagtcgatcatcaccgcgttcggtaccggtatccat
gacgagttcgatatcgcgaagttgcggtatcacaagatcgtgttgatggccgatgccgat
gtcgatggccagcacatcgcgacgctactgctgacgttgttgttccggttcatgcgcccg
ctggtcgaacagggccacgtgtatctggcccagccgccgttgtacaagctcaagtggcag
cgcagcgatccggagttcgcctactccgaccgcgaacgcgacacgatgctcaccgagggg
ctggccgccggtaagaagatcaacagcgatgacggcgtccagcgctacaaaggtcttggc
gagatgaacccgaaagaactgtgggagaccaccatggacccttctgtgcgcgtactacgt
caggtgacgttggacgacgccgccgcggccgacgagctgttcagcgtgctgatgggtgaa
gatgtgggggcccgccgcggcttcatcacccgtaatgccaaggacgttcgcttcctcgac
gtgtga
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