KEGG   Nocardia iowensis: KV110_28580
Entry
KV110_28580       CDS       T07470                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
nie  Nocardia iowensis
Pathway
nie02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:nie00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    KV110_28580
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nie03021]
    KV110_28580
Transcription machinery [BR:nie03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     KV110_28580
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 HC2 HTH_20
Other DBs
NCBI-ProteinID: QXN89446
UniProt: A0ABX8RPT6
LinkDB
Position
6208706..6210076
AA seq 456 aa
MVATNTRQTADSAEADSADVTEARPVRKAAAAKKAPAKKAAAAKKAPAKKAAAKATKGPA
KKAATKKVGPDGEPGADEPIEDVEIEDLGDLEVSEDDLTEEAEDLVVEEVAEAAEEEVEP
TAADKASGDFVWDEEESEALRQARKDAELTASADSVRAYLKQIGKVALLNAEEEVELAKR
IEAGLYAAEKVREFTEHGEKLPVAMRRDYTWIVRDGNRAKNHLLEANLRLVVSLAKRYTG
RGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHM
VEVINKLGRIQRELLQDLGREPTPEELAKEMDITPEKVLEIQQYAREPISLDQTIGDEGD
SQLGDFIEDSEAVVAVDAVSFTLLQDQLQSVLETLSEREAGVVRLRFGLTDGQPRTLDEI
GQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq 1371 nt   +upstreamnt  +downstreamnt
gtggtagccacgaatacccgtcagaccgccgattcggccgaggccgattccgcagatgta
accgaagcacggccggtccgtaaggcggctgccgcgaagaaggccccggcgaagaaggcc
gccgcggccaagaaggcgcctgcgaagaaggccgccgccaaggcgaccaaggggcccgcc
aagaaggctgccaccaagaaggtgggaccggacggcgaacccggcgccgacgagccgatc
gaggacgtcgagatcgaagacctcggcgatctagaggtctctgaggacgatctcaccgaa
gaggccgaggacctggtcgtcgaagaggtcgccgaagccgccgaggaggaggtcgaaccg
accgccgccgacaaggcgtcgggcgatttcgtctgggacgaagaggaatccgaagccctg
cggcaggcccgcaaggacgcggagctcaccgcttcggccgactcggtgcgcgcctacctc
aagcagatcggcaaggtcgcgctcctcaacgccgaagaggaggtcgaactcgccaagcgg
atcgaggcaggcctctacgcggcggagaaggtccgcgagttcaccgagcacggtgagaag
ctgccggtcgcgatgcgccgcgattacacctggatcgtccgcgacggcaaccgcgccaag
aaccacctgctcgaagccaacctgcgactggtcgtctcgctggccaagcgctacaccggc
cgcggcatggcgttcctcgacctgatccaggagggcaacctgggtctgatccgcgccgtc
gagaagttcgactacaccaagggctacaagttctccacgtacgccacctggtggatccgt
caggccatcacccgcgccatggccgaccaggcccgcaccatccgcatcccggtgcacatg
gtcgaggtcatcaacaagctcggccgcatccagcgcgagctgctccaggacctgggccgc
gagcccaccccggaagagctggccaaggaaatggacatcacgccggagaaagtgctggag
atccagcagtacgcgcgtgaacccatctcgctggaccagaccatcggcgacgagggcgac
agccagctcggtgacttcatcgaagactccgaagccgttgtcgccgtggacgcggtgagc
ttcacgctgctgcaggaccaactgcagtcggtgctggagaccctgtccgagcgcgaggcg
ggcgttgtccggctgcgcttcggcctcaccgacggccagccgcgcaccctcgacgagatc
ggccaggtgtacggggtcacccgcgaacgcatccggcagatcgagtccaagaccatgagc
aagctgcgccaccccagccgctcccaggtcctgcgcgactacctggattaa

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