Nocardia iowensis: KV110_28580
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Entry
KV110_28580 CDS
T07470
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
nie
Nocardia iowensis
Pathway
nie02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
nie00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KV110_28580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nie03021
]
KV110_28580
Transcription machinery [BR:
nie03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KV110_28580
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HC2
HTH_20
Motif
Other DBs
NCBI-ProteinID:
QXN89446
UniProt:
A0ABX8RPT6
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All DBs
Position
6208706..6210076
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AA seq
456 aa
AA seq
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MVATNTRQTADSAEADSADVTEARPVRKAAAAKKAPAKKAAAAKKAPAKKAAAKATKGPA
KKAATKKVGPDGEPGADEPIEDVEIEDLGDLEVSEDDLTEEAEDLVVEEVAEAAEEEVEP
TAADKASGDFVWDEEESEALRQARKDAELTASADSVRAYLKQIGKVALLNAEEEVELAKR
IEAGLYAAEKVREFTEHGEKLPVAMRRDYTWIVRDGNRAKNHLLEANLRLVVSLAKRYTG
RGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHM
VEVINKLGRIQRELLQDLGREPTPEELAKEMDITPEKVLEIQQYAREPISLDQTIGDEGD
SQLGDFIEDSEAVVAVDAVSFTLLQDQLQSVLETLSEREAGVVRLRFGLTDGQPRTLDEI
GQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
gtggtagccacgaatacccgtcagaccgccgattcggccgaggccgattccgcagatgta
accgaagcacggccggtccgtaaggcggctgccgcgaagaaggccccggcgaagaaggcc
gccgcggccaagaaggcgcctgcgaagaaggccgccgccaaggcgaccaaggggcccgcc
aagaaggctgccaccaagaaggtgggaccggacggcgaacccggcgccgacgagccgatc
gaggacgtcgagatcgaagacctcggcgatctagaggtctctgaggacgatctcaccgaa
gaggccgaggacctggtcgtcgaagaggtcgccgaagccgccgaggaggaggtcgaaccg
accgccgccgacaaggcgtcgggcgatttcgtctgggacgaagaggaatccgaagccctg
cggcaggcccgcaaggacgcggagctcaccgcttcggccgactcggtgcgcgcctacctc
aagcagatcggcaaggtcgcgctcctcaacgccgaagaggaggtcgaactcgccaagcgg
atcgaggcaggcctctacgcggcggagaaggtccgcgagttcaccgagcacggtgagaag
ctgccggtcgcgatgcgccgcgattacacctggatcgtccgcgacggcaaccgcgccaag
aaccacctgctcgaagccaacctgcgactggtcgtctcgctggccaagcgctacaccggc
cgcggcatggcgttcctcgacctgatccaggagggcaacctgggtctgatccgcgccgtc
gagaagttcgactacaccaagggctacaagttctccacgtacgccacctggtggatccgt
caggccatcacccgcgccatggccgaccaggcccgcaccatccgcatcccggtgcacatg
gtcgaggtcatcaacaagctcggccgcatccagcgcgagctgctccaggacctgggccgc
gagcccaccccggaagagctggccaaggaaatggacatcacgccggagaaagtgctggag
atccagcagtacgcgcgtgaacccatctcgctggaccagaccatcggcgacgagggcgac
agccagctcggtgacttcatcgaagactccgaagccgttgtcgccgtggacgcggtgagc
ttcacgctgctgcaggaccaactgcagtcggtgctggagaccctgtccgagcgcgaggcg
ggcgttgtccggctgcgcttcggcctcaccgacggccagccgcgcaccctcgacgagatc
ggccaggtgtacggggtcacccgcgaacgcatccggcagatcgagtccaagaccatgagc
aagctgcgccaccccagccgctcccaggtcctgcgcgactacctggattaa
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