KEGG   Nocardia iowensis: KV110_29465
Entry
KV110_29465       CDS       T07470                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
nie  Nocardia iowensis
Brite
KEGG Orthology (KO) [BR:nie00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:nie03016]
    KV110_29465 (truB)
Enzymes [BR:nie01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     KV110_29465 (truB)
Transfer RNA biogenesis [BR:nie03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    KV110_29465 (truB)
 Prokaryotic type
    KV110_29465 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C TruB_C_2
Other DBs
NCBI-ProteinID: QXN89594
UniProt: A0ABX8RJ17
LinkDB
Position
complement(6385934..6386839)
AA seq 301 aa
MDGLGGLLIVDKDGGWTSHDVVAKCRKLLRTKKVGHAGTLDPMATGVLVLGVERATKLLG
LLTLTTKAYTATIRLGQATTTDDAEGEVLSTTPALHLTDDEIAAHTAELTGDIEQVPATV
SAIKVNGERAYARHRAGEDVQLAARPVTVSRFDILARRDVSDGEFVDLDVAVECSSGTYV
RALARDLGAALAVGGHLTALRRTRVGPFTLEHARTLDELATAAESDASLLSLDMDEAVRT
AFPHRDIDETQADDLRNGRWLDPIGLPGVYAAIDPAGRAIALLQESGKRAASVMVVRPSN
L
NT seq 906 nt   +upstreamnt  +downstreamnt
atggatgggctcggcgggctgctgatcgtcgacaaggacggcggctggaccagccacgac
gtcgtcgcgaaatgccggaaactgctgcgcaccaagaaggtcgggcacgcgggcaccctc
gacccgatggcgaccggggtgctcgtgctcggcgtggagcgggccaccaaactgctcggc
ttgctgacgctgaccaccaaggcgtacaccgcgaccatccggctcggccaggccaccacc
accgacgacgccgagggggaggtgctgtcgaccaccccggccctgcacctcaccgatgac
gaaatcgccgcgcacaccgccgaactcaccggtgacatcgaacaggtgcccgccacggtg
agcgcgatcaaggtgaacggcgaacgcgcctacgctcggcaccgcgcgggtgaagacgtg
cagctggcagcccgcccggtcaccgtgtcccgcttcgacatcctcgcccgtcgcgatgtt
tcggacggtgaattcgtcgacctcgacgtggcggtcgaatgctcctcgggcacctacgtg
cgcgcccttgcccgcgacctgggtgccgccctcgccgtcggcggacacctgacggccttg
cgccgcaccagagtcggcccgttcaccctcgaacatgcccgcaccctcgacgaattggcg
accgccgccgaatccgacgcctcgctgctcagtctggacatggacgaggcggtccgaacc
gccttcccgcaccgggacattgacgagacgcaagccgacgacttacgcaacggccgctgg
ctcgacccgatcggcctccccggcgtctacgccgccatcgacccggcgggacgcgcgatc
gcgctgctccaggagagcggcaagcgcgccgcatccgtgatggttgttcgcccgtccaac
ctgtaa

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