Nocardia iowensis: KV110_30550
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Entry
KV110_30550 CDS
T07470
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
nie
Nocardia iowensis
Pathway
nie03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nie00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KV110_30550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nie03400
]
KV110_30550
Enzymes [BR:
nie01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
KV110_30550
DNA repair and recombination proteins [BR:
nie03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KV110_30550
Prokaryotic type
KV110_30550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QXN89774
LinkDB
All DBs
Position
complement(6616614..6617297)
Genome browser
AA seq
227 aa
AA seq
DB search
MGAKPLSEIMDPGWAKALESVADRISAMGEFLRAENAAGRGYLPAGENVLRAFQRPFDAV
RVLVVGQDPYPTPGHAMGLSFSVAPDVSPVPRSLANIFAEYTKDLGHPTPSCGDLTPWSD
QGVLMLNRVLTVTPGQPASHRGKGWEAVTEQAIRALVARDEPLVAILWGRDASTLKPTLV
AAEVPYIESAHPSPLSASRGFFGSRPFSRVNELLDELGAEPVDWRLP
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcgaaaccactgtcggaaatcatggatccgggatgggcgaaggcactcgagtcg
gtggcggatcggatttccgccatgggcgagttcctgcgggcagagaacgcggcgggccga
gggtacctaccggccggtgagaacgtgctacgcgccttccagcgtcccttcgacgcggtc
cgcgtgctggtcgtcggccaggacccgtacccgactcccggccacgcgatgggcttgagt
ttctctgtcgcaccggatgtttcgccggtcccgcgcagcttggcgaacatcttcgccgaa
tacaccaaggatctcggccatccgacgccgtcctgcggtgacctgaccccctggtccgat
cagggtgtgctgatgctgaacagggtgctgacggtgacgccgggccagcccgcctcgcat
cgcggcaagggctgggaggcggtgaccgagcaggcgattcgcgcgctggtggcgcgggac
gagccgctggtcgcgatcctctggggccgcgacgcgtcgaccctcaagcccaccttggtc
gcggccgaggtgccctacatcgagtccgcgcatccctcgccgctgtcggcgtcgcgcggc
ttcttcggttcccgcccgttctcccgagtgaacgaactgctcgacgaactcggcgccgaa
cccgttgactggcgcctgccctga
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integrated database retrieval system
