Nitrospira sp. KM1: W02_05960
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Entry
W02_05960 CDS
T08344
Symbol
radA
Name
(GenBank) DNA repair protein RadA-like protein
KO
K04485
DNA repair protein RadA/Sms
Organism
nif
Nitrospira sp. KM1
Brite
KEGG Orthology (KO) [BR:
nif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nif03400
]
W02_05960 (radA)
DNA repair and recombination proteins [BR:
nif03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
W02_05960 (radA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
GvpD_P-loop
DnaB_C
AAA_22
AAA_16
SLFN-g3_helicase
NTPase_1
DUF7129
AAA_24
nSTAND3
AAA
AAA_14
RecA
AAA_19
ATPase_2
HepII_C
NACHT
AAA_5
DZR
Motif
Other DBs
NCBI-ProteinID:
BCA53456
UniProt:
A0A679HR53
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All DBs
Position
complement(615490..616851)
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AA seq
453 aa
AA seq
DB search
MKAKTNFSCQACGHQAPRWLGRCPDCGGWNTMKEERQAPTGKGRPVVMKSAPARATPIGD
IEVVGEDRRLTRIGEFDRVLGGGVIPGGVMLIGGDPGIGKTTLLLQALPRLASAEQPVLY
VSGEESPRQIKMRGQRLGIEHPNLLVLAETSLEQILKSVQDIQPAALVVDSIQTVYTEQI
TSAPGSISQVQEVAGQLMWFAKRSGVPVFIIGHVTKEGAIAGPRLLEHIVDTVLYFEGDK
GHSYRILRAVKNRFGSTNEIGVFEMKDSGLEEVTNPSELFLAERPQRSTGSVVVSSLEGS
RPILVELQALVSSTSYAMPKRMANGVDLNRVSLLLAVMEKRLGLHLSGQDVYVNVVGGMH
IDEPAIDLGVVAAVTSSLREVPVENGLLVLGEIGLSGEVRAISQAELRIREAAKMGFKRC
LLPERNLAKLERIDGIELVGITEVGEALDVVLA
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctaagaccaacttttcctgccaggcctgcgggcaccaggctccccggtggttg
ggtcgctgcccggattgcggcggctggaatacgatgaaggaagaacggcaggctccgacc
ggcaaaggtcggccggtcgtcatgaagtccgctccggcccgggcgactccgatcggcgac
atcgaagtcgtcggcgaagatcgccggttgacacgtatcggggagttcgatcgggtgctt
ggcggcggcgtcattccaggcggcgtgatgttaatcggcggcgatccgggaatcggtaag
acgacgcttctccttcaggccttgccgcggcttgcatcggctgagcagccggttttgtat
gtatccggggaagaatcgccacgccaaatcaaaatgcgcgggcagcggctcgggatcgag
catcccaatctcctggttcttgccgaaacctcgctcgagcagatcctcaaatcggtgcag
gacatccagccggcggcgctcgtcgtggattcgattcaaaccgtctatacggaacagatt
acctcggcccccggcagcatcagccaggttcaggaagtcgcgggacagttgatgtggttc
gcaaagcggtccggtgtgccggtgttcatcatcgggcacgtgacgaaggagggggcgatt
gccggtccacgattgctggaacatatcgtggatacggtactctattttgagggggacaag
ggccacagctaccggatcctccgggcggtcaagaatcgcttcgggtctaccaatgagatc
ggtgtctttgaaatgaaggactccgggctcgaggaggtgaccaacccgtccgaactgttt
ctcgccgagcggccgcaacggagcaccggctcggtcgtggtctcgagcctggaaggcagc
aggcccatcctcgtggaattgcaggcactcgtgtcctcgacgagttatgcgatgcccaag
cgcatggccaacggcgtcgatctcaaccgcgtatccttgctcctggccgtgatggaaaaa
cgcctcggccttcatttgtccgggcaggacgtgtacgtgaacgtggtgggcggcatgcac
attgacgagccggcgatcgatctgggtgtcgtcgcagcggtgacctcaagcttgcgcgaa
gttcctgtcgaaaacgggctcctcgtgctcggggagatcggcctgagcggagaggttcgg
gccatcagccaggcggaattgcggattcgcgaagcggccaaaatgggatttaagcggtgt
ttattgccggagcggaatctggcgaaactcgaacggatcgatggcatcgaactggtcggt
attaccgaagtgggagaagcactcgatgtggtcttggcctag
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