Nitrospira sp. KM1: W02_07820
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Entry
W02_07820 CDS
T08344
Symbol
cobD
Name
(GenBank) Cobalamin biosynthesis protein CobD
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
nif
Nitrospira sp. KM1
Pathway
nif00860
Porphyrin metabolism
nif01100
Metabolic pathways
nif01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
nif00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
W02_07820 (cobD)
Enzymes [BR:
nif01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
W02_07820 (cobD)
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Motif
Pfam:
CobD_Cbib
Motif
Other DBs
NCBI-ProteinID:
BCA53642
UniProt:
A0A679HXD8
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Position
complement(818913..819872)
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AA seq
319 aa
AA seq
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MAMTAADVISACALDAVIGDPRRFPHPVRMMGSASVWFEQVIRASCRRPLALRIAGTVLA
LGLPAVAAIGGWAVIAVATGIHEWIGFVVNLWLASTVLAWRDLMDHSNRVLDALRQTDLV
EARKAVSLIVGRDTDPLSEQEIVRATVETVAESASDGVVAPLFYLTLGGVPLALAFKAVS
TLDSLVGHQDDQYREFGWASARLDDLLNWIPSRLTGWLMVAAGAIVMRDLQAATRGATVL
LRDGHKHASPNSGRPEAAMAGAIGVQLGGESYYDGKRVVRPYLGEPVHALSPNHIEQAQR
IMSVSYVLGIAGSIVCLAL
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggccatgacagccgccgacgtgatttcggcctgtgcattggacgcggtaatcggagac
ccgcgccgattccctcatccggttcggatgatgggatcagccagcgtgtggttcgaacag
gtgatccgcgcatcgtgccggcgtccgctggctcttcggatagccggtacggtgctcgcc
ttgggattgccggctgtcgccgcaatagggggatgggctgtcattgccgtcgccaccggg
atccacgagtggattggattcgtggtcaacctgtggcttgccagtacggtgttggcttgg
cgcgatctcatggaccattcgaaccgtgttctcgatgcactgcggcaaaccgatcttgtc
gaagcaaggaaggcggtgagcctgattgttggccgtgacaccgacccactctccgaacag
gagatcgtcagggcgaccgtcgagaccgtcgcagaaagcgcctctgatggcgttgtcgcg
ccgctcttctatctgactctcggtggtgtgccgctcgcattggcctttaaagccgtgagc
acactcgattcgctggtcggacaccaggacgaccagtatcgagagtttgggtgggcgtcc
gcgaggttggacgatctgctcaactggattccgtcacggctcacgggatggttgatggtt
gcggcgggagcaattgtcatgcgggatttgcaagccgccacacgcggtgccaccgttctg
cttcgcgatggacacaagcatgcgagcccaaacagcggtagaccggaagctgcgatggcg
ggtgcaatcggtgtgcagttaggaggcgaaagctattatgacggcaaaagggtcgtaaga
ccgtatctcggggaacctgtccatgcgctctcccccaatcatattgaacaggcccaacgt
atcatgagcgtctcttatgttctcggtattgcgggatcgatcgtatgtctggcactgtaa
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