Nitrospira sp. KM1: W02_09820
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Entry
W02_09820 CDS
T08344
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
nif
Nitrospira sp. KM1
Brite
KEGG Orthology (KO) [BR:
nif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nif03016
]
W02_09820
Enzymes [BR:
nif01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
W02_09820
Transfer RNA biogenesis [BR:
nif03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
W02_09820
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GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
S1
Motif
Other DBs
NCBI-ProteinID:
BCA53842
UniProt:
A0A679HXX7
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Position
998748..1000208
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AA seq
486 aa
AA seq
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MTNDRVNLRDIARRAMAERDLFPDFSSAAIAELARIHAPADQTPNTRDLRKWLWASIDND
DSRDLDQLTVAEQRRDGSVTVMVAVADVDALVAKDSALDAHAGHNTTSVYTSGGIFPMLP
EKLSTDFTSLNEGQDRQAIVVELLVAQDGSVTASTLFQALVRNHAKLTYDGVSAWLTGTA
PAPDAVMAVSGLDAQLRLQDQAAQRLKTRRHQQGALSLETIESRAVFDGDVLTRLRVEEK
NRAKQLIEDFMIAANQATAGYLRHMGIPSFRRILHSPERWERIMEMAARWGERLPPEPDA
RALEAFLTKRRQADPVRFPDLSLAVVKLIGRGEYVLDESCDGAPEHFGLAVKGYTHSTAP
NRRYPDLVTQRLIKSALAPTSPPYRIDELRYLAAHCTEKEDDAERVERQLRKSAAALLLG
SQIGHQFDAIVTGSSDKGTWVRLLDPPVEGKLITGGLGLDVGDTVHVKLVSTDVERGHID
FSRVPY
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacgatcgtgtcaacctgcgagacatcgcccgccgtgccatggcagagcgggat
ttgttccccgatttttcctctgcggcaattgccgaactcgcccgcatacatgcacccgcg
gatcagacgccgaacacacgtgacttacggaagtggctctgggcctctatcgataatgac
gactcgcgcgatcttgatcaattgaccgtagccgagcagcgccgggacggctcggtgacg
gtgatggttgccgtcgccgacgtcgatgcactggtcgccaaggattcggcgctggatgcg
catgccggacacaacaccacctcggtgtacacgtcgggcggcatcttccccatgcttccg
gaaaaactttcgaccgactttacatcgctcaatgaggggcaggatcgtcaggcgatcgtc
gtcgaactcctcgtcgcccaagacggttcggtgactgcatccacgttgtttcaagcgctg
gtgcgcaaccatgcgaagctgacctatgacggcgtctccgcatggctgacgggtacggcg
ccggcaccagacgccgtgatggccgtgtcgggtctcgatgcgcaacttcgtttacaggac
caagcggcacagcggctgaaaacgagacgacaccagcagggggcgttgagcttggagacg
atcgaatcccgagccgtctttgacggtgacgtcctgacgcgtctcagagtcgaagaaaag
aaccgggccaagcaattgatcgaagatttcatgatcgcggcgaatcaagcaaccgccgga
taccttcggcacatgggaattccatcgttccgacgtatcctgcattcaccggaacggtgg
gagcggatcatggagatggcggcacgctggggcgagcgcctgccgccggaaccggacgcc
cgcgcgctggaagcgttcctgacaaaacgccggcaagccgatccggtcagattccccgac
ttgtccttggccgtcgtaaaactgatcggccggggcgaatatgtgctggacgaatcatgt
gacggcgctcccgagcacttcggactcgcggtcaaagggtatacgcactcgacggctcca
aaccgccgctatccggaccttgtcacccagaggctgatcaaatccgctctggcaccgacg
tcacctccgtatcgaatcgatgaattacggtatctggccgcacattgtacggaaaaggaa
gacgatgccgagcgcgtcgaacgtcagctgagaaaatccgcagccgcattgctgctgggc
tcacagatcggacatcagttcgatgcgattgtgacaggatcctctgacaaaggaacctgg
gttcgtttgctggaccctccggtggaagggaaactcatcactggaggtcttggattagat
gtgggagataccgtgcacgtaaagctcgtcagcacggatgtcgaacgcggccatatcgat
ttttcgagagtgccctactga
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