KEGG   Nitrospira sp. KM1: W02_11330
Entry
W02_11330         CDS       T08344                                 
Symbol
ribD
Name
(GenBank) Riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
nif  Nitrospira sp. KM1
Pathway
nif00740  Riboflavin metabolism
nif01100  Metabolic pathways
nif01110  Biosynthesis of secondary metabolites
nif01240  Biosynthesis of cofactors
nif02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:nif00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    W02_11330 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    W02_11330 (ribD)
Enzymes [BR:nif01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     W02_11330 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     W02_11330 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD HEAT_IPO9_c
Other DBs
NCBI-ProteinID: BCA53993
UniProt: A0A679HSZ9
LinkDB
Position
complement(1191363..1192481)
AA seq 372 aa
MTTRTQDLAYMTLALRLAEKGRGTASPNPMVGALVVKGGRIVGQAYHHRAGRPHAEVLAI
RQAGIRARGATLYVTLEPCCHTQKRTPPCVPDIIRAGIRRVVIAMTDPNPMVKGRGTAAI
RRAKLAITTGVGRAQAEALNRTYRHWMMTKRPHVTLKAGMTLDGQIATSTGESRWITGRQ
SRREVHRLRSQVDAVLVGAGTVIADNPSLTARMGRGFMRLNRRQPLRVVVDGRGRIPLSA
KILSDQWCARTLVAVTASVPAARLSALRNKKVETIVIPAAGGRVLLPKLLAELGRRGVTS
LLIEGGSELNAAMLRAKLVDHVMMYVAPALLGGDDARGVIGGKAPVRLIDAIRLRRFRCR
AVGADILIEGDL
NT seq 1119 nt   +upstreamnt  +downstreamnt
gtgaccacccgcactcaggacctcgcgtacatgaccctggctcttcgccttgcggagaag
ggccggggaacggcgagccccaatccaatggtcggcgctctcgtcgtcaaaggcggccgg
atcgtcgggcaggcctatcatcaccgggccggccgtccgcatgccgaagtgctcgccatt
cggcaggcggggatccgcgcccggggcgccactctctacgtgacgttggaaccgtgctgt
cacactcaaaaacggacgcctccctgcgttcccgacatcatacgagcgggaattcggcgg
gtcgtcatcgccatgaccgacccgaatcccatggtgaaaggccgtgggacggctgcgatc
cgccgggcgaagttggcgatcacgacaggtgtgggacgggcgcaggcggaggcattgaat
aggacctatcggcattggatgatgacgaagcgtccgcatgtgacgttgaaggccggtatg
acgctcgacggtcagatcgcgacgtccacgggtgagtcacgatggatcaccggccggcaa
tcccgccgcgaggtgcatcgtctgcgttcacaagtcgatgcggtactcgtcggcgcgggc
acggtcatcgccgataatccctccctgacggcccggatgggccgcgggttcatgcggttg
aatcgccgccagccgctgcgggtcgttgtggacggcagagggcgcataccgctgagtgcc
aagatactctcagatcagtggtgcgccagaacgctcgtcgctgtgacggcgtcggttccg
gcggctcgattgtcggccttgcggaacaagaaggtcgaaacgattgtgatcccggcggct
ggaggccgcgtgctcctcccgaaattgcttgccgagctcggacgccgaggagtcacctcg
ttgcttatcgaagggggaagcgaactcaatgccgccatgctgagggcgaaattggtcgat
cacgtcatgatgtatgtggcgccggcgctcttgggtggggatgacgccaggggcgtcatc
ggagggaaagctcccgttcgcctgatcgacgcgatccggcttcgacggttccgctgtcgc
gccgtgggcgccgatattctgatcgaaggagatctgtga

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