Nitrospira sp. KM1: W02_11880
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Entry
W02_11880 CDS
T08344
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
nif
Nitrospira sp. KM1
Pathway
nif00541
Biosynthesis of various nucleotide sugars
nif01100
Metabolic pathways
nif01250
Biosynthesis of nucleotide sugars
Module
nif_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
nif00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
W02_11880 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
nif01005
]
W02_11880 (kdsB)
Enzymes [BR:
nif01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
W02_11880 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
nif01005
]
Lipid A
W02_11880 (kdsB)
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Motif
Pfam:
CTP_transf_3
NTP_transf_3
SQHop_cyclase_C
Motif
Other DBs
NCBI-ProteinID:
BCA54048
UniProt:
A0A679I098
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Position
complement(1260605..1261405)
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AA seq
266 aa
AA seq
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MSKTERQVTVVIPARYGSSRFPGKPLARLGRKPMIQHVYEQAVACRAVTNVLVATDDDRI
KQAIEQFGGRVVMVKGDYRTGTDRVAAVATMYAGEYFVDLQGDEIPLDPDLLTDLIDPFL
RANVEMGTLKRAMDTTDDLQNPAIVKVVTDAQGYALYFSRAPVPMVRDDADGRVVGGLHH
VHLGLYMYTRKALLRFAEWPTSTLEDAEKLEQLRALENGMRIRVWETKHASLRVDTPEDV
PEVADKLQKFEVLKRELNLTRGPAGR
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaagacggagcggcaggtcacggtagtgattcccgcccgctacggatcatcacgc
tttccgggaaaaccgttggcgcgtctggggcgcaagcccatgatccagcacgtctatgaa
caagccgtcgcctgtcgtgccgtcaccaacgtgctcgtagccaccgatgacgaccgcatc
aaacaggccattgaacaattcggcgggcgcgtcgtcatggtgaaaggtgactaccggacc
ggaacggaccgggttgcggcggtcgccaccatgtatgccggagaatatttcgtggatctt
caaggggatgaaattccacttgatccggatctgttgaccgatttgatcgatccgtttctc
cgggccaatgtggagatgggcacgttgaaacgggctatggacaccacggatgatctgcag
aaccccgccatcgtcaaggtggtcaccgatgcgcagggctacgccctgtatttttcacgc
gccccggttccgatggtccgcgatgacgccgacggacgtgtcgtgggcggacttcatcat
gtccacctcgggctgtacatgtacaccagaaaggccttgctgcgttttgccgagtggccg
accagcacattggaagatgcggaaaaactggaacaactccgggcactggagaacgggatg
cgcatcagagtgtgggaaacgaaacatgcgtcgcttcgggtcgacacgcctgaggatgtt
ccggaggtggctgacaaacttcagaagttcgaagttctgaagcgcgaactcaacttgacg
cgaggaccagccggccgatga
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