Nitrospira sp. KM1: W02_18860
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Entry
W02_18860 CDS
T08344
Symbol
msbA
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
nif
Nitrospira sp. KM1
Pathway
nif02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
nif00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
W02_18860 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nif02000
]
W02_18860 (msbA)
Enzymes [BR:
nif01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
W02_18860 (msbA)
Transporters [BR:
nif02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
W02_18860 (msbA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
ABC_ATPase
Zeta_toxin
AAA_29
MMR_HSR1
AAA_21
AAA_30
AAA_23
AAA_14
DUF87
DEAD
T2SSE
AAA_28
nSTAND_NTPase5
RsgA_GTPase
AAA_18
Dynamin_N
NB-ARC
P-loop_TraG
AAA_15
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BCA54746
LinkDB
All DBs
Position
1997554..1999284
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AA seq
576 aa
AA seq
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MQNFRRFIPFLKPYLGRMVLAGLLVMIVAAINLLLLRLAGHVWDVITVHHDVEGMTRLIG
WFLALVVVQGVCSMGHSYLTAWVSQRIVADFRIHLFSHLQRLSVSFFTKRRTGELLSRLM
NDVTVIQSITTDTPIDTAKQLVTLIGGIGFLLVMNWRLCLLILILLPLLVLVARLFGRRL
KSLSTSIQDQTAALSTVIEEVISGIRIVKSFVQTDREQGRFSDHIEKALQLTMTRAGIMA
LFIPVISLLTFSAAAAVLWYGGAQVIDGTVSAGDLFAFVLFAGILIGPFSSAARVFAQLR
EAQGATQRVFEILDARSEVSDRPGATSVTTITGRLQLEQVGFHYDLRQPVLMDISFEAQP
GECIAIVGPTGSGKSTLMNLLHRFYDPTQGVIRVDGRDLRDISLESWYRQVALVPQETVL
FGGTILDNIRYGNQEASEKAVEEASRAAHAHDFITAFPDAYQTVVGEKGINLSGGQRQRI
AIARAILKNSRVLLLDEATSALDSESERLVQEAFERLMTGKTTFVVAHRLTTIQRADRIL
VLNQGRIVETGTHGDLLGRKGLYHYLYTLRLNELPA
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaattttagacgattcatcccgttcctgaagccgtacctcggtcggatggttttg
gccggactattggtgatgatcgtcgccgccatcaatcttctactgttgaggctggcgggg
cacgtgtgggatgtcatcacggtccaccatgacgtcgagggcatgacgcgtctgatcggg
tggtttctcgccttggtcgtcgtgcaaggcgtgtgctccatgggacacagctacctgacc
gcctgggtgtcccaacgcatcgtcgctgactttcgtattcacctgttttctcatcttcaa
cgactctccgtcagctttttcaccaaaaggcgtaccggtgaattgctgtctcgtctcatg
aacgacgtgaccgtgatccagtcgatcacgacggatactcctatcgacacggcgaaacaa
ctcgtgaccttgatcggcgggatcggatttcttttggtcatgaattggcggctctgtctg
ttgattctgattctgcttccgctgctggtgctggtcgcacggttgttcggccgccgtctt
aaatccctttcaacgtcaatacaggaccaaaccgcagcgctcagtaccgtcatcgaagaa
gtgatttccggtatccgcatcgtcaagtcgttcgtacagaccgaccgtgaacaagggcgg
ttctccgatcacatagagaaggcgcttcaactgaccatgacgcgggcaggtatcatggcc
ctgttcattcccgtcatcagtctcttgacgttttcagcggctgcagcggttctctggtac
ggaggggcacaagtgattgatggcaccgtgtcggccggcgatctctttgcgttcgtactc
tttgccggtattctaatcggcccattcagttcggccgcgagagtctttgcgcaattacga
gaggcacaaggagccacccaacgagtctttgaaattctcgatgcacgatccgaagtctca
gacaggccaggagcgacctccgtaacgacaatcacgggacggttgcagctcgaacaggtc
ggctttcattacgacctgcgccaaccggtgctcatggatatttcctttgaggcgcaacct
ggagaatgcatcgcgatagtggggccaaccggttcagggaaaagcacgctcatgaatctt
cttcatcggttttatgatccgacgcaaggggtgattcgcgtcgacggacgggatcttcga
gatatctctctcgagagctggtatcggcaggtcgcactcgtgccgcaggaaactgtgttg
ttcggaggaacgattttggacaacattcgatacggcaaccaagaggcaagcgagaaggcg
gttgaagaagccagccgtgcagcacacgcccacgacttcatcaccgcctttcccgacgcg
taccaaaccgttgtcggcgagaaaggcatcaatctctcaggcggccaacgtcaacgcatt
gccatcgcacgagccatcttgaaaaactccagagtcctcctgctcgacgaagccacgtct
gcgctggacagtgaatcggagcgcctcgtccaggaggcctttgaacgattgatgactggg
aaaaccactttcgtcgtcgctcaccgactcacgactattcagcgagccgaccgtattctc
gtcctgaatcaaggccgcatcgtggaaaccggcactcacggcgatttgctgggccgaaag
gggctgtatcactacctgtataccctgagactcaatgaattaccggcatga
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