KEGG   Nitrospira sp. KM1: W02_20230
Entry
W02_20230         CDS       T08344                                 
Symbol
rmlC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
  KO
K01790  dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
Organism
nif  Nitrospira sp. KM1
Pathway
nif00521  Streptomycin biosynthesis
nif00523  Polyketide sugar unit biosynthesis
nif00541  Biosynthesis of various nucleotide sugars
nif01100  Metabolic pathways
nif01110  Biosynthesis of secondary metabolites
nif01250  Biosynthesis of nucleotide sugars
Module
nif_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:nif00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    W02_20230 (rmlC)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    W02_20230 (rmlC)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    W02_20230 (rmlC)
Enzymes [BR:nif01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.3  Acting on carbohydrates and derivatives
    5.1.3.13  dTDP-4-dehydrorhamnose 3,5-epimerase
     W02_20230 (rmlC)
SSDB
Motif
Pfam: dTDP_sugar_isom Nudc_N
Other DBs
NCBI-ProteinID: BCA54883
LinkDB
Position
complement(2139901..2140476)
AA seq 191 aa
MHITSLDIPGVLLIEPKVFRDSRGFFVETYHELRYREAGLSERFVQDNVSKSIRRTLRGL
HFQDPHAQGKLVMVLEGSVYDVVVDIRKGSPTFGTWYGVELSSENMRQVYVPPGCAHGFC
VTSDTATFLYKCTDYYAPKDERGIIWSDPALAIAWPVSDPLLSAKDQTYRSLAEMSAELP
SYLQVRSKDGH
NT seq 576 nt   +upstreamnt  +downstreamnt
atgcacatcacgtctctcgacattcccggtgttctcctcattgaaccgaaagtgtttcgt
gactcgcgtggatttttcgtcgagacgtatcatgagctgcggtaccgtgaggctggattg
agcgaacgattcgtccaggataacgtttccaaatccatccgtcgcaccctgcgagggctg
cattttcaggatccgcatgctcaaggcaagttagtgatggtgctcgaaggatcggtctat
gacgtggtcgtcgatatccgaaagggttcgccgacattcggtacgtggtacggggtcgaa
ctgtcctctgagaacatgcgccaggtgtacgtacctcctggatgtgcgcacggattctgc
gtcaccagcgacacggcgacctttctctacaaatgcacggactactacgctccgaaggat
gagcgggggattatctggagcgatccggccctcgcgattgcctggcccgtatcggatccc
cttctctctgcaaaagatcagacctatcgctcattggctgagatgagcgctgagttgcct
tcctatctgcaagtacgtagcaaggacggccattga

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