Nitrospira sp. KM1: W02_21460
Help
Entry
W02_21460 CDS
T08344
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
nif
Nitrospira sp. KM1
Brite
KEGG Orthology (KO) [BR:
nif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nif03016
]
W02_21460 (truB)
Enzymes [BR:
nif01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
W02_21460 (truB)
Transfer RNA biogenesis [BR:
nif03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
W02_21460 (truB)
Prokaryotic type
W02_21460 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
BCA55006
LinkDB
All DBs
Position
complement(2265074..2266024)
Genome browser
AA seq
316 aa
AA seq
DB search
MDGVLIVHKEAGWTSHDVVAKLRSVLGVSKVGHAGTLDPAATGVLPVLTGRGTRIAEYLV
EWDKEYRAVLRLGETTDTQDATGMVLSRHLAGHITGPEIEHALERFRGVIQQVPPMYSAL
KVDGVPLYRSARAGKTIVREARSITVSHLDLLSFDGTDATLRVVCSKGTYVRTLCADIGE
ILGVGGHLLALERSRVGPLTLDHAMSVEEIARRQALGILSHTMLSLDRALNEFPVLVVNG
QTAARVRNGVSVPFADVLNRETATDCTPRQDSIVRIHDEGGTLLAIGRGPDRSGAVYAIE
KVLVDRDHGSVSRREL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggacggtgtccttatcgtacacaaagaggccggatggacctcgcacgatgtcgtggca
aagctgcgttctgtccttggcgtcagcaaggtcggtcatgccggcacattggatcccgcc
gcaacaggcgtgttacccgtgctcacgggacgaggtactcgaatcgccgagtatttggtg
gaatgggacaaggaatatcgagccgtgctgcgtctcggagaaacgacggatacgcaagat
gccaccgggatggtcttgtccaggcacctcgccggtcatatcacaggaccggaaatcgag
cacgcgcttgaaagatttcgaggagttattcagcaagtgccgccgatgtattccgcactc
aaggtcgacggcgttccattgtatagatcggcgcgtgcgggaaaaaccattgtccgcgag
gccagatcgatcaccgtcagtcacttggatttgctgtcgttcgatggaactgacgcgacg
cttcgtgtggtgtgttccaaaggcacatatgttcgtacgctgtgtgctgatatcggtgag
atcctgggcgtcggagggcaccttctcgcgttggaacgttctcgcgtaggcccgctcacc
ctcgatcatgccatgtccgtcgaagagattgccaggcgtcaagcactgggaattctttca
cacacgatgctctcgctggatcgagcactgaacgaatttcctgtgctggtggtaaatggt
cagacggccgcgagagtgcggaacggagtctccgttccttttgctgatgtactcaatcgg
gaaaccgcgacggactgtacgccacggcaggactcgatcgtccgtatccatgacgaaggc
ggaacgctgctggcgattggaagaggtccggaccgatcaggcgcggtgtatgcgatcgaa
aaggttctggtcgatcgagaccacggttcagtaagtaggagagaattgtaa
DBGET
integrated database retrieval system
