Nitrospira sp. KM1: W02_21950
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Entry
W02_21950 CDS
T08344
Symbol
nifA
Name
(GenBank) Nif-specific regulatory protein NifA
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
nif
Nitrospira sp. KM1
Brite
KEGG Orthology (KO) [BR:
nif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nif03000
]
W02_21950 (nifA)
Transcription factors [BR:
nif03000
]
Prokaryotic type
Helix-turn-helix
Other families
W02_21950 (nifA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF_2
GAF
GAF_3
AAA_5
Mg_chelatase
HTH_8
AAA_2
AAA
AAA_16
AAA_22
AAA_3
MCM
Motif
Other DBs
NCBI-ProteinID:
BCA55055
UniProt:
A0A679I050
LinkDB
All DBs
Position
complement(2314477..2316114)
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AA seq
545 aa
AA seq
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MLNGDLTPHQPRIADRRDHSPGEQEPVESTGDFLSGGLQMRDTDESYRALLAVTNVLNSQ
RDTDSLWRAITEQIRKVLPWERAGVTLYNPDTNSFRFYAVETTMPQRELQRDAVIPKAGS
AVGWVYENRTIHVRPNLQRQRLFLEDDYYVREGLGRMINSPLMIGNTCIGTLNIGSVECG
EPDPSDLEFLQLVATQIAYAIDHVRAYEQIDRLRHQLEHENEYLVEELKLTHNFGAMVGL
SAAFRTALGQAEAVGPTSTTVLVTGETGTGKELMARAIHELSTRRDKPFVRVNCAALPMG
LVESELFGHERGAFTGADQRRPGRFELANGGTLFLDEIGEMPLEAQAKLLRVLEDGLVDR
VGGTRPVPVDVRIVAATNSDLVNAVNEGRFRQDLYYRLHVFPILLPPLRDRREDIPLLAR
HFLEAYRSKLKRAVLELNPESLTRLTNYSWPGNVRELQNVIERAVILARSPVVTVEPLAT
VNGVSESTSNLIDVERRHILRVLESVHWRIYGTYGAAAQLGMNPSTLRSRMKKLGLSRPL
NLPLS
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgctgaatggagatcttacccctcaccagccgcggattgctgaccgtcgcgatcattcg
ccgggagagcaggaacctgtcgaatcgaccggcgatttcttgtccggaggattgcagatg
cgggataccgatgaaagttatcgggcgctgctggccgtcaccaacgtcctgaactctcaa
cgcgacaccgacagtctctggcgcgccatcaccgagcagatacggaaagtgctgccctgg
gagcgcgctggcgtcactctgtacaatccggacaccaactcgttccgcttctacgctgtc
gaaaccacgatgccgcagcgagaacttcagcgcgatgccgtgattcccaaagctggcagc
gccgtcggatgggtgtatgaaaatcggactatccacgtgcgaccgaacctgcaacgccag
cggttgtttctggaggacgattactatgtccgtgaaggactgggacggatgatcaactct
ccactgatgatcggtaacacctgcatcggcacgctgaacatcggcagcgtcgagtgcggg
gagccggatccatccgatctggaatttctccagttggtggcgacgcagattgcctatgcc
atcgaccacgtgcgggcgtacgagcagatcgatcgtctccgccatcagttggagcacgaa
aacgaatatctggtcgaagagctcaagctgacgcataacttcggagcgatggtgggtctc
agcgccgcgtttcgcaccgcgttgggacaggcggaagcggtgggcccgacgtcgaccacc
gtgctcgtcaccggcgagaccgggactggcaaggaactcatggcacgggccattcatgag
ctgagcactcgccgtgataagccattcgtccgcgtgaactgtgcggcgctcccgatgggg
ctcgtcgaaagcgagttgttcggccatgagcgcggagcgttcacgggcgcggaccaacgg
cgtcccgggcggttcgagctggccaacggcggaacactctttctcgatgagatcggcgag
atgccgctggaagctcaggccaagctgctccgcgtgctcgaggacggtctggtggatcgt
gtgggaggaacccgtcctgttccggtcgatgttcgcatcgttgcggcgaccaactccgac
ctggtgaacgccgtcaacgaaggccggttcaggcaggatctgtactatcggctgcacgta
tttccgattctgttgcctcccttgcgtgatcgccgggaggatatcccgctgctcgcccgc
cattttttggaagcgtaccggtcgaagttaaagcgtgccgtgctggagctcaatccggag
tcgttgacgcgactgacgaattattcctggcccggcaatgtccgtgaactacagaacgtg
atcgaacgggcggtgattctggcgcgctcaccggttgtcaccgtcgaaccgctggcaacc
gtgaacggtgtgtcggaatccacgtccaatctcatcgacgtcgagcgcaggcatatcctg
cgtgtcttggaatccgttcattggcggatctatgggacatatggcgctgcggcgcagctc
ggtatgaatcccagcacgcttcgaagccgcatgaagaagctcggtctgagccgtccgttg
aatcttcccctctcctaa
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