Nitrospira sp. KM1: W02_23810
Help
Entry
W02_23810 CDS
T08344
Symbol
gyrB
Name
(GenBank) DNA gyrase, subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
nif
Nitrospira sp. KM1
Brite
KEGG Orthology (KO) [BR:
nif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nif03032
]
W02_23810 (gyrB)
03400 DNA repair and recombination proteins [BR:
nif03400
]
W02_23810 (gyrB)
Enzymes [BR:
nif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
W02_23810 (gyrB)
DNA replication proteins [BR:
nif03032
]
Prokaryotic type
DNA Topoisomerases
W02_23810 (gyrB)
DNA repair and recombination proteins [BR:
nif03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
W02_23810 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_insert
GyrB_hook
C2orf69
Motif
Other DBs
NCBI-ProteinID:
BCA55241
UniProt:
A0A679HKZ7
LinkDB
All DBs
Position
2507700..2510189
Genome browser
AA seq
829 aa
AA seq
DB search
MATKESDDTSQHPRDVKSDSYSADQIKVLEGLEAVRKRPAMYIGSTGVDGLHHLVYEVVD
NSVDEHMAGFGESIEVMIHIDGSVTVIDNGRGIPTGMHPTQKKSAAEVALTVLHAGGKFE
QGAYTVSGGLHGVGISVVNALSEWLELEIWQDGLVFEQHYERGKPGAPLNNTGKTKRRGT
QVRFKPDGQVFETLEFSFDVLAQRLRELAFLNKGLTITLKDERREPAKEQVFLYKGGIVS
FVEHLNEAKTPLHKPIYAKVERSEMIMEVALQYNDSYAENLFSFANNINTKEGGTHLVGF
KAALTRTINNYANANELLKKDTESLTGDDVREGLTAVISVKVRNPQFEGQTKAKLGNSEV
KGVVEAAVNEALGTYFEENPPVARKIIGKAIDAARAREAARKAKDLIRRKSALDGGSLPG
KLADCSEKDPAVSELYIVEGDSAGGSAKQGRDRRFQAILPLKGKILNVEKARFDKMLTSD
EIRTLIMALGTGIGRKREEGDKADKDTFDIAKARYHKIILMTDADVDGSHIRTLLLTFFF
RQMPELLERGYIYIAQPPLFKVKKGKAERYLKDEGALNEHLADLAVEEVELYVEGAQEFV
TGRRVLPVLKKMIAFETLVARLNKRMPEAAMLRAFVDEPGLDRDLLKDRAALEATVASVK
RTLALVFPKLEAAIDISPDEEHQSNKVTCRLQANGALYTLDITHEVVGSADFRELQKLAP
SAIGLGRVPYRLKAKGQELQQHSTAEVVRTILDVGKQGLSIQRYKGLGEMNPEQLWDTTM
NPEVRTLLKVRLEDVTGVDEIFTILMGDEVEPRRNFIQAHALEVRNLDV
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaaagaatccgacgacacctctcaacaccctcgcgacgtcaaatccgatagc
tatagtgccgaccagatcaaagtcttggaggggctcgaagccgttcgcaagcggccggcg
atgtacattggcagcacgggtgtggatggcttgcaccacctcgtgtacgaggtcgtcgat
aacagtgtcgatgagcacatggccggattcggcgaatcgatcgaggtgatgatccacatc
gacggcagcgtcaccgtcatcgacaacggccggggcattcctaccggaatgcacccgact
caaaaaaaatccgccgcagaagtcgcgctcaccgtcttgcatgcgggaggaaaattcgaa
cagggggcctatactgtctccggcggtctccacggtgtcgggatctccgtcgtcaacgcg
ctgtccgaatggttggaattggaaatctggcaggacggactggtatttgaacagcactac
gaacggggcaagcccggggcgcccttgaacaacacgggaaaaacgaaacgtcgaggaacc
caagtccgcttcaagccagacgggcaggtttttgaaacgctggaattcagttttgacgtg
ctcgcgcaacggcttcgggaacttgcctttctgaacaaagggctgacgatcaccctcaag
gacgaacggcgagaaccggccaaggaacaggtctttctctacaaggggggtatcgtctcg
ttcgtcgagcatctgaacgaagcgaagacgccgctccacaagccgatttatgccaaggtt
gaacgatccgagatgatcatggaagtcgctctccagtacaacgacagctacgcggaaaac
cttttttcgttcgccaacaacatcaataccaaagaaggcggcacgcatctggtgggattt
aaagcggccctgaccagaacgatcaataattacgccaatgccaatgagttgctgaagaaa
gataccgaatcactcaccggagacgacgttcgagaaggattgacggcggtcatcagcgtc
aaagtgcggaatccgcagttcgaaggtcagacgaaagcaaagctcggcaacagcgaggtc
aaaggtgtcgtcgaggccgcggtgaatgaagcgcttgggacgtatttcgaagagaaccct
ccggtcgcccgtaagatcatcggcaaagccatcgatgccgccagggcccgcgaggctgcc
cggaaagccaaagaccttatccgtcgcaagagcgcgctcgacggaggttcgctcccggga
aaacttgccgactgctcggaaaaagatccggcggtcagcgaactgtatattgtcgaggga
gattcggccggcgggtcagccaaacaaggacgggatcggaggttccaggcgattctgcct
cttaaggggaagatcctcaatgtcgagaaggcgcgattcgataagatgctgacgagcgac
gaaatccgcacgctcatcatggcgcttggaacgggcatcggccgcaagcgtgaggagggt
gacaaggcggataaagacaccttcgacattgcgaaagcgcggtaccacaagattattctc
atgaccgatgcggatgtggacgggagtcatatccgcacccttctgctcaccttcttcttc
cgccaaatgcccgaattgctggaacgcggttatatctacatcgctcaacctcccctcttc
aaggtgaaaaaggggaaggcggagcggtatctgaaggacgaaggcgcattaaacgaacac
ctggcggacctcgccgtcgaggaagtggagttgtatgtcgaaggggcgcaggagttcgtc
acagggcgccgcgtactgccggtcctgaaaaaaatgatcgcgttcgagacgctggtggcc
cggttgaataagcggatgcctgaggcagcgatgctgcgcgcctttgtcgacgaaccggga
ctggaccgtgatctcctcaaggatcgtgcggcgttggaggcgacggtggcaagtgtgaag
cggacgctggcgctcgtgtttcccaaactggaagcggcaatcgatatttccccggacgaa
gaacatcaatcgaacaaggtcacctgccggctccaggcaaacggggccctgtacactctg
gacattacgcacgaagtggtgggttcggcggatttccgcgagctccagaagttggctccc
tcagcgataggattaggccgggtcccctacaggttgaaggcaaagggccaggagcttcaa
cagcactctacggctgaagtggtccggacaattctggatgtcggcaaacaaggcttgagc
atccagcgctacaaaggtctcggcgaaatgaatccggagcagctctgggacacgaccatg
aatccggaggtccgtaccctcttgaaggtccggctcgaagatgtgaccggtgtcgacgag
atctttacgattctgatgggagacgaagtggaacctcgacggaacttcatccaagcgcat
gccctcgaggtgagaaatttggacgtatag
DBGET
integrated database retrieval system
