Nitrospira sp. KM1: W02_25610
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Entry
W02_25610 CDS
T08344
Symbol
dnaX
Name
(GenBank) DNA polymerase III
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
nif
Nitrospira sp. KM1
Pathway
nif03030
DNA replication
nif03430
Mismatch repair
nif03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
W02_25610 (dnaX)
03430 Mismatch repair
W02_25610 (dnaX)
03440 Homologous recombination
W02_25610 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nif03032
]
W02_25610 (dnaX)
03400 DNA repair and recombination proteins [BR:
nif03400
]
W02_25610 (dnaX)
Enzymes [BR:
nif01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
W02_25610 (dnaX)
DNA replication proteins [BR:
nif03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
W02_25610 (dnaX)
DNA repair and recombination proteins [BR:
nif03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
W02_25610 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
AAA_30
RuvB_N
AAA_22
AAA_5
TIP49
PIF1
RCF1-5-like_lid
AAA_18
AAA_14
AAA_assoc_2
DUF3646
AAA_19
AAA_2
TsaE
TPR-S
Glyco_tranf_2_5
nSTAND3
SKI
AAA_28
ABC_tran
CbiA
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
BCA55421
UniProt:
A0A679HLG4
LinkDB
All DBs
Position
2687910..2689724
Genome browser
AA seq
604 aa
AA seq
DB search
MDYQVSARKYRPGTFDDVIGQGHVVQTLVNSITTKRIAQAYLFSGTRGVGKTTIARILAK
ALNCEQGPTGTPCAACSNCLEIAQGTSVDVIEIDGASNTSVDDVREIRENVKFTPFRGSY
RVYIIDEVHMLSNSAFNALLKTLEEPPPHVVFIFATTEIHKIPATILSRCQHYNFRRIAR
QEIIERLRHVARQEDITIEERSLTALARASEGSMRDALSLLDQAIAFGGKTIVHADLEAL
LGAVPQELLRVMIQAITAQDSAEALDVLAQLLDQGHDLRAYCAEVVEYVRNMLVIAVTAQ
QDWPRLIEASPDDLAQIAADRGALTPEQLQQLFTLFTQAEDALRLSAHPRFVLETAAVRA
TRLLRLSEATPVHRERPASGPPPQPTKASPDKTKNTSAERPSTSVASRTDSRPATPPPAG
PSVGHSESRKAPVPAADEKVENKGLETASEQNDRRVASAPVRAQAAVLNWEQLQDEVAHN
HPNIAPFLEMGRFVGIEGNVVTVGFAKQAMTARSLLEKPDNMHVLTSLCERLSGQPVKLR
IVELSDNHPPGPTMAQIRAAKEQEQKVVLFEQARAHPVVKQALEMFGAELADVRAVSHQK
GVEE
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggactatcaggtctcagcaagaaaatatcgccccggcaccttcgacgacgtgatcggt
cagggacacgtcgtgcagacgctcgtcaactcgattacgaccaagcgaattgcgcaggcc
tatcttttttccgggactcggggcgtcgggaagaccaccatcgcgcgcattctggccaaa
gcgctcaactgcgagcagggaccgaccggcacgccctgcgccgcctgttccaactgtctt
gaaatcgctcaaggaacatctgtagacgtcatcgagatcgacggcgcatccaatacgagc
gttgatgatgtgcgggaaattcgggagaacgtaaaattcactcccttccgaggctcgtat
cgggtctacatcatcgacgaagtgcatatgctctcgaattccgctttcaatgccctgctc
aagacattggaggagccgccgccgcacgtcgtcttcatctttgcgacgacggagattcat
aagatccccgcgacgattctgtcgcgatgccaacactataactttcgacgtatcgcacgg
caggagatcatcgaacggcttcgccatgtggctcgacaggaagatatcacgatagaggag
cgaagtttgacggcgcttgccagagccagcgaaggcagcatgcgagatgcactgagctta
ctggatcaggcgatcgcgtttggcggcaagacgattgtccatgccgatctcgaggcgcta
ttgggagccgttccccaggaactccttcgggtgatgatccaggccattaccgcccaagac
agcgcagaggcgctggacgtgctcgcccaactattggatcaggggcacgatctccgagcc
tattgcgcggaggtggtcgagtatgtgcggaacatgctggtcatagccgtgacggctcag
caggactggccgcggttgatcgaagcgtcgccggacgatcttgcgcagattgcggctgat
cgaggagcactcactccggagcagcttcagcaactgtttactcttttcactcaggctgaa
gacgcattgagattgagcgcgcatcccaggttcgttttggaaactgccgctgtgcgtgct
accaggctgctccggctttccgaggcgactccggtacatcgagagcggccagcttccggg
ccgcctcctcaacccacgaaggcttcgccggacaagacaaagaatacgtcggccgagcga
ccatcaacttccgtcgcttcgagaaccgattcccggcctgccacaccgcctccagcaggt
ccctccgttggtcactccgaatcacgaaaggccccggttccggctgccgacgagaaggtg
gaaaacaaaggattggagacagcgagcgagcagaatgaccgacgggttgcatccgcgccg
gtgcgcgcgcaggcggcggtactcaattgggaacaacttcaagatgaagtggcccacaat
catcccaatatcgctccatttttagaaatgggtcggtttgtgggtatcgaggggaatgtc
gtgacggtcggcttcgccaaacaggccatgacggccaggagtctgttggaaaaaccagac
aacatgcacgttctgacatcgctgtgcgaacggctgagcggtcagcccgtaaagcttcgg
atcgtcgaattatccgacaatcatccgccgggtccgacgatggcgcagatacgggcggcg
aaagaacaagaacaaaaggtggtgctgttcgagcaagcacgagcccatcccgtcgtcaag
caggcgctggagatgttcggagccgagcttgccgatgtgagggcggtgtcgcaccagaag
ggagtagaggaatga
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