KEGG   Nitrospira sp. KM1: W02_25610
Entry
W02_25610         CDS       T08344                                 
Symbol
dnaX
Name
(GenBank) DNA polymerase III
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
nif  Nitrospira sp. KM1
Pathway
nif03030  DNA replication
nif03430  Mismatch repair
nif03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:nif00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    W02_25610 (dnaX)
   03430 Mismatch repair
    W02_25610 (dnaX)
   03440 Homologous recombination
    W02_25610 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nif03032]
    W02_25610 (dnaX)
   03400 DNA repair and recombination proteins [BR:nif03400]
    W02_25610 (dnaX)
Enzymes [BR:nif01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     W02_25610 (dnaX)
DNA replication proteins [BR:nif03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     W02_25610 (dnaX)
DNA repair and recombination proteins [BR:nif03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     W02_25610 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_delta2 DNAX_ATPase_lid AAA DNA_pol3_gamma3 AAA_30 RuvB_N AAA_22 AAA_5 TIP49 PIF1 RCF1-5-like_lid AAA_18 AAA_14 AAA_assoc_2 DUF3646 AAA_19 AAA_2 TsaE TPR-S Glyco_tranf_2_5 nSTAND3 SKI AAA_28 ABC_tran CbiA Herpes_Helicase
Other DBs
NCBI-ProteinID: BCA55421
UniProt: A0A679HLG4
LinkDB
Position
2687910..2689724
AA seq 604 aa
MDYQVSARKYRPGTFDDVIGQGHVVQTLVNSITTKRIAQAYLFSGTRGVGKTTIARILAK
ALNCEQGPTGTPCAACSNCLEIAQGTSVDVIEIDGASNTSVDDVREIRENVKFTPFRGSY
RVYIIDEVHMLSNSAFNALLKTLEEPPPHVVFIFATTEIHKIPATILSRCQHYNFRRIAR
QEIIERLRHVARQEDITIEERSLTALARASEGSMRDALSLLDQAIAFGGKTIVHADLEAL
LGAVPQELLRVMIQAITAQDSAEALDVLAQLLDQGHDLRAYCAEVVEYVRNMLVIAVTAQ
QDWPRLIEASPDDLAQIAADRGALTPEQLQQLFTLFTQAEDALRLSAHPRFVLETAAVRA
TRLLRLSEATPVHRERPASGPPPQPTKASPDKTKNTSAERPSTSVASRTDSRPATPPPAG
PSVGHSESRKAPVPAADEKVENKGLETASEQNDRRVASAPVRAQAAVLNWEQLQDEVAHN
HPNIAPFLEMGRFVGIEGNVVTVGFAKQAMTARSLLEKPDNMHVLTSLCERLSGQPVKLR
IVELSDNHPPGPTMAQIRAAKEQEQKVVLFEQARAHPVVKQALEMFGAELADVRAVSHQK
GVEE
NT seq 1815 nt   +upstreamnt  +downstreamnt
atggactatcaggtctcagcaagaaaatatcgccccggcaccttcgacgacgtgatcggt
cagggacacgtcgtgcagacgctcgtcaactcgattacgaccaagcgaattgcgcaggcc
tatcttttttccgggactcggggcgtcgggaagaccaccatcgcgcgcattctggccaaa
gcgctcaactgcgagcagggaccgaccggcacgccctgcgccgcctgttccaactgtctt
gaaatcgctcaaggaacatctgtagacgtcatcgagatcgacggcgcatccaatacgagc
gttgatgatgtgcgggaaattcgggagaacgtaaaattcactcccttccgaggctcgtat
cgggtctacatcatcgacgaagtgcatatgctctcgaattccgctttcaatgccctgctc
aagacattggaggagccgccgccgcacgtcgtcttcatctttgcgacgacggagattcat
aagatccccgcgacgattctgtcgcgatgccaacactataactttcgacgtatcgcacgg
caggagatcatcgaacggcttcgccatgtggctcgacaggaagatatcacgatagaggag
cgaagtttgacggcgcttgccagagccagcgaaggcagcatgcgagatgcactgagctta
ctggatcaggcgatcgcgtttggcggcaagacgattgtccatgccgatctcgaggcgcta
ttgggagccgttccccaggaactccttcgggtgatgatccaggccattaccgcccaagac
agcgcagaggcgctggacgtgctcgcccaactattggatcaggggcacgatctccgagcc
tattgcgcggaggtggtcgagtatgtgcggaacatgctggtcatagccgtgacggctcag
caggactggccgcggttgatcgaagcgtcgccggacgatcttgcgcagattgcggctgat
cgaggagcactcactccggagcagcttcagcaactgtttactcttttcactcaggctgaa
gacgcattgagattgagcgcgcatcccaggttcgttttggaaactgccgctgtgcgtgct
accaggctgctccggctttccgaggcgactccggtacatcgagagcggccagcttccggg
ccgcctcctcaacccacgaaggcttcgccggacaagacaaagaatacgtcggccgagcga
ccatcaacttccgtcgcttcgagaaccgattcccggcctgccacaccgcctccagcaggt
ccctccgttggtcactccgaatcacgaaaggccccggttccggctgccgacgagaaggtg
gaaaacaaaggattggagacagcgagcgagcagaatgaccgacgggttgcatccgcgccg
gtgcgcgcgcaggcggcggtactcaattgggaacaacttcaagatgaagtggcccacaat
catcccaatatcgctccatttttagaaatgggtcggtttgtgggtatcgaggggaatgtc
gtgacggtcggcttcgccaaacaggccatgacggccaggagtctgttggaaaaaccagac
aacatgcacgttctgacatcgctgtgcgaacggctgagcggtcagcccgtaaagcttcgg
atcgtcgaattatccgacaatcatccgccgggtccgacgatggcgcagatacgggcggcg
aaagaacaagaacaaaaggtggtgctgttcgagcaagcacgagcccatcccgtcgtcaag
caggcgctggagatgttcggagccgagcttgccgatgtgagggcggtgtcgcaccagaag
ggagtagaggaatga

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