Nitrospira sp. KM1: W02_25770
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Entry
W02_25770 CDS
T08344
Symbol
gcvP
Name
(GenBank) Glycine dehydrogenase, glycine cleavage system P protein
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
nif
Nitrospira sp. KM1
Pathway
nif00260
Glycine, serine and threonine metabolism
nif00630
Glyoxylate and dicarboxylate metabolism
nif00670
One carbon pool by folate
nif00785
Lipoic acid metabolism
nif01100
Metabolic pathways
nif01110
Biosynthesis of secondary metabolites
nif01200
Carbon metabolism
Module
nif_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
nif00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
W02_25770 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
W02_25770 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
W02_25770 (gcvP)
00670 One carbon pool by folate
W02_25770 (gcvP)
Enzymes [BR:
nif01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
W02_25770 (gcvP)
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Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
BCA55437
UniProt:
A0A679HYA8
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Position
2704243..2707128
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AA seq
961 aa
AA seq
DB search
MAIPEFMNSTDSFINRHLGVTDADQREMLAILGAQSLQALSDATIPADIQLKRELDLPPH
RSEQTVLHDLQALAAENRVYRSLIGMGYYQCVTPAVIQRNILENPGWYTQYTPYQAEIAQ
GRLEALVNFQTMVAELTGLPLANSSLLDEATAAAEAMAMCLSVARSLGQERTEFFISQDC
HPQTVGVMQTRAEPLGLTVHVGRTAAIDFGNPKLSGIMLQYPATDGYVGDYSSLVSRAHE
AGVIVVVATDLLALTLLRPPGEFGADIAIGSSQRFGVPLGFGGPHAAFIACKEEYKRQLP
GRIVGVSKDKTGRRAYRLSLQTREQHIRREKATSNICTAQVLLAIMASMYAIYHGPEGLQ
RIARRIHGLAMVLAAGLRQLGFEIRNEVFFDTLRVTLTKYQADQVLVRADEQGMNLRRFG
DDSIGVALDEVSSEKEVRSILEVFVGHNRLPFALSDLAETGQQTFTEGVARTSPYLTHEV
FNRYHAEHEMLRYLHRLQSRDLSLTHSMIPLGSCTMKLNATTEMLPITWPEFSRLHPFAP
VEQTKGYLELFRQLEGWLAEITGFAAVSLQPNAGSQGEYAGLMVIRAFHRNHGEFHRDIC
LIPVSAHGTNPASAAMVGMTVVPVACDKQGNVDLIDLEAKAAQHRERLAALMLTYPSTHG
VFEPGVRRICQIVHTHGGQVYMDGANMNAQVGLCRPGDIGADVCHLNLHKTFCIPHGGGG
PGMGPIAVARHLAPFLPGHPVAGSSNQDAIGPVSAAPYGSPSILTIPWVYIALMGRDGLT
KATQVAILNANYMAKRLEKHYSILYTGAQGFVAHEFILDLREFKDSAGIEVMDVAKRLMD
YGFHAPTVSFPVAGTLMIEPTESESKAELDRFCEAMILIRAEIQDVIDNRQPRAGNLLKN
APHTAETATATQWDRPYTREQAVYPAPWVKDRKFWPHVGRIDEAFGDRNLMCTCPPMDTY
Q
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggccattcccgaattcatgaattcgacggattcttttatcaaccgacatctcggggtg
accgatgccgaccaacgcgaaatgctggccattctcggggcacaatctcttcaggctctg
agtgatgccacgataccagccgacattcaattgaagcgtgagctggatctgccaccgcat
cgaagtgaacaaacggtgctgcacgatttacaggcgttagctgcggagaaccgagtctat
cggtccctgatcggcatgggctattaccaatgcgtcactcccgctgtcatacaacggaat
attctggaaaacccaggatggtacacccagtacacgccgtatcaggctgagatcgcccaa
ggccggcttgaagccctcgtgaatttccaaaccatggtggcggagttgaccgggctgcca
ctggccaactcctcgcttctcgatgaagccacggcggcggcggaagccatggcgatgtgt
ctgtccgtggcccggagcctgggacaggaacgaacggaatttttcatctcacaagattgt
cacccccagacagtgggggttatgcagaccagagccgaaccactcggcctgactgtgcat
gtcgggaggacggcggcgatcgacttcggcaatccaaaattgagcggaatcatgttgcag
tatccggccaccgacgggtatgtcggagattacagttctctggtgagccgcgcccatgag
gccggagtcatcgtagtggtcgcgacggacctgttggcgttgacgttgctgcgtcctccc
ggtgaattcggagcggatattgcgatcggatccagccagcgatttggtgtgccactcgga
ttcggcggtcctcacgcggcatttatcgcttgcaaagaagaatataagaggcagttaccg
ggccggatcgtcggcgtttccaaggataagaccggacgcagggcgtatcgactgtccctt
cagactcgcgagcagcatatccggcgggagaaagcgacaagtaatatctgtaccgctcaa
gtgctgctggcgatcatggcaagcatgtatgcgatctaccatggcccggaggggttgcag
cgaattgcccgccggattcacggattggccatggtgttggctgcagggctccgtcaatta
ggattcgagatccggaatgaagtatttttcgacaccctgagggtgacattgacgaaatac
caggctgaccaagtactggttcgagctgatgagcagggaatgaatttgagacggtttggt
gacgattccatcggcgtggcattggatgaagtgagcagtgaaaaggaggtccggtccatt
ttggaggtctttgtcggacacaatcggctgccctttgcgctgagcgaccttgccgagacg
ggacaacagacattcacggaaggcgtcgccaggacgagcccctatttgacgcacgaggtc
ttcaaccgatatcacgctgaacatgagatgctccgatatcttcatcggcttcaatcacgg
gacctttctcttacccattccatgatcccgcttggttcttgcacgatgaaactgaacgcg
acgactgagatgctgccgatcacgtggccggaattttcacgccttcatccattcgcgcct
gtcgaacaaacaaaaggttatttggaattgttcaggcagttggagggctggctggccgag
attacaggattcgcagccgtgtccctgcaaccgaacgccggttctcaaggagagtacgcc
ggcctaatggtcattcgcgcttttcatcggaaccacggagaattccatcgtgatatctgt
ctgattcccgtctcggcgcatgggacgaatccggcgagtgcggccatggtggggatgacc
gtggtgcccgtggcatgcgataagcaggggaatgtggatctgatcgacctggaggctaaa
gcggcgcagcatcgcgagcggctggcggcgctgatgctgacgtatccctccacgcatggg
gtgtttgaacctggcgtgcgtcggatctgtcagatcgtgcacacgcatggcggacaggtg
tacatggatggggcgaatatgaatgcgcaggtcggactatgtcgtccgggtgatattggg
gccgacgtgtgccatctcaatttgcataagacgttctgcatccctcatggtggcggcggt
ccaggcatgggaccgattgcagtcgctcggcacctcgcgccgttccttcccggccacccg
gttgcaggatcgagcaatcaggatgcgatcggacccgtatccgcggctccctatgggagc
ccgagtattctgacgattccctgggtgtatatcgccttgatgggacgggacggactcacc
aaggccacacaggtagccattctcaacgcgaactacatggcgaaacggttggagaagcac
tattccatcttgtatacgggtgctcaagggtttgtcgcccatgagttcatcctcgatctg
cgtgagttcaaagacagtgccggcattgaggtgatggatgtggcaaaacgcctgatggat
tacggattccatgccccgacggtctcgtttcccgttgccggtactctgatgatcgaaccg
acggagagtgaatcaaaggccgaactcgaccggttctgtgaggccatgatcttaattcgt
gccgagattcaagacgtcatcgacaaccgacagccacgggcaggcaacttgctcaagaat
gctccccataccgctgaaacagcgacggccacgcaatgggaccgtccgtatacccgtgaa
caagccgtatatccggcgccctgggtgaaagaccgtaagttctggcctcatgttggccgg
atcgatgaggccttcggcgaccgcaatctcatgtgcacctgtccgccgatggatacctac
caataa
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