Nitrospira sp. KM1: W02_27040
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Entry
W02_27040 CDS
T08344
Symbol
rpsA
Name
(GenBank) 30S ribosomal subunit protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
nif
Nitrospira sp. KM1
Pathway
nif03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
nif00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
W02_27040 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
nif03011
]
W02_27040 (rpsA)
Ribosome [BR:
nif03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
W02_27040 (rpsA)
Bacteria
W02_27040 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Spt6_S1
S1_2
PCB_OB
DUF2110
Motif
Other DBs
NCBI-ProteinID:
BCA55564
UniProt:
A0A679HM40
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Position
2828502..2830220
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AA seq
572 aa
AA seq
DB search
MSTVSNTNEQQLDRDALAALYEETFKNLQEGTITEGRVVALTKDKVVVDIGYKSEGMIPS
DQFASEELQNIKIGDRLQVYIEECEDADGNLILSKEKADKMKIWEELEKLYKDEKSIDGK
VVSRIKGGMMVDIGVKAFLPGSQIDLHPVRDLDGLVGRTFPMKIIKINHRRGNVVVSRRV
LLEETRDKKRQTTLATLKEGQLIQGTVKNITDYGAFIDLGGIDGLLHITDMSWGRVGHPS
EMFNVGDRVEVSVLKYDRETGRISLGLKQKSADPWTNVAGKYPIGTRVRGKVVSLTDYGA
FVELEPGVEGLVHVSEMSWTHEVRHPSRVVAIGDQVEAAVLNVDPASRKISLGMKQTAPN
PWDMVEGKYPIGTRIEGKVKSLTDFGAFIGLDEGIDGLIHISDMSWTKHIKHPSELFKKA
QKVEAVVLRIDKEKERLSLGYKQLSRDPWDDEIPGRYRVGDSTSGKVSKVADFGIFVELD
GGVEGLIHISEAGLDSSVKLEDKFKLQDEVTAKIIKVDREERKIALSLRDHQLDSERRHV
DEYHAAQGAPDQSLGRAAKQSRKRAAAEDDER
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggtttcgaacaccaacgagcagcaattggatcgcgatgccctggccgccctc
tatgaggaaaccttcaagaatttgcaggagggtaccatcacggagggccgcgtcgtggct
ctgacgaaggataaagttgtggtcgacatcggctacaagtcggagggcatgattcccagc
gaccaattcgcgagcgaggagctccagaacatcaagatcggcgaccggctacaggtctat
attgaagagtgcgaagacgccgacggcaacctgattctttccaaagaaaaagccgacaag
atgaagatctgggaagaattggaaaaactgtacaaggacgagaaaagcatcgacggcaaa
gtcgtgtcgcgcatcaagggcggcatgatggtggacattggggtgaaggcatttctgccg
ggttcacagatcgatctgcacccggtgcgtgacttggacggtctcgtcggtcgcacgttt
ccgatgaagatcatcaagatcaatcatcgtcgcgggaatgtcgtggtgtcccgcagggtg
ctgctcgaagagacgagagataagaagcggcagaccacgctggcgacattaaaagaaggt
caactcatccagggtacggtcaagaacatcacggactacggagccttcatcgatctcggc
ggcattgacgggctgctccacatcaccgacatgtcgtggggacgcgtggggcatccgtcg
gagatgttcaacgtcggcgaccgcgtggaagtcagcgtgctcaagtatgaccgggagacc
ggccgcatttccctggggctgaagcaaaagtccgcagatccgtggaccaacgtcgccggc
aagtatcccatcggcacgcgcgtgcgcggaaaggtcgtgagcctcaccgactatggagcc
tttgtagaactcgagccgggcgtcgaagggctcgtgcacgtctcggaaatgtcctggacg
catgaggtgcggcatccatcgcgggtggtggcaatcggcgaccaggtcgaagcggcggtg
ctgaatgtggatcccgccagccgcaagatttcactcgggatgaagcagacagcgccaaac
ccatgggatatggtcgagggaaaatatccgatcggcacccgtatcgaaggcaaggtcaag
agcctgactgatttcggtgcgttcattggcttggacgagggcatcgacggattgatccac
atttccgacatgtcatggacgaagcacatcaagcacccgtccgagttgtttaaaaaagcc
cagaaagtcgaagccgttgtgttacggatcgacaaagagaaggagcggctgtctctcgga
tacaagcagttgtcgcgtgatccttgggacgacgagatccccggccggtatcgggttgga
gactccacgagcggcaaagtcagcaaggtggcagactttggaatcttcgtcgagttagac
ggcggcgtggaaggactgatccacatcagcgaagcgggtctggactcaagcgtcaagctg
gaagacaagttcaaactccaggacgaagtcacggccaagatcatcaaagtcgatcgtgag
gagcggaaaatcgcgttgagtctgcgcgaccatcagctggactctgagcggcgccatgtg
gacgaatatcacgccgcgcagggtgctccggatcaaagcttggggcgtgcggcaaagcag
agtcgtaaacgcgctgccgccgaagacgacgaacggtag
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