Nitrospira sp. KM1: W02_27060
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Entry
W02_27060 CDS
T08344
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
nif
Nitrospira sp. KM1
Brite
KEGG Orthology (KO) [BR:
nif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nif03032
]
W02_27060 (ihfB)
03036 Chromosome and associated proteins [BR:
nif03036
]
W02_27060 (ihfB)
03400 DNA repair and recombination proteins [BR:
nif03400
]
W02_27060 (ihfB)
DNA replication proteins [BR:
nif03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
W02_27060 (ihfB)
Chromosome and associated proteins [BR:
nif03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
W02_27060 (ihfB)
DNA repair and recombination proteins [BR:
nif03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
W02_27060 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
DUF2267
PWI
Motif
Other DBs
NCBI-ProteinID:
BCA55566
UniProt:
A0A679HXA5
LinkDB
All DBs
Position
2831221..2831499
Genome browser
AA seq
92 aa
AA seq
DB search
MTKAQIIERVSEQVTTLTKRQAEIVVNTIFDCVRDSLKNGDKTEIRGFGSFRLRSRRMKE
GRNPKTGATVAVPAKKVPFFKAGKELKELLNQ
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaggcccagatcatcgaacgcgtttccgagcaggttacgacgctgacgaagcgc
caggcggaaatcgtcgtgaatacgatttttgactgcgtcagagattcgttgaaaaacgga
gacaaaacagagattcgtgggttcggaagctttcgactccggtctcgccgcatgaaggag
gggcggaatccaaagacgggagcgaccgtcgccgttccggccaaaaaggttccattcttc
aaagccggcaaggaactcaaagaacttctcaaccagtag
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