Nitrospira sp. KM1: W02_27720
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Entry
W02_27720 CDS
T08344
Symbol
lysA
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
nif
Nitrospira sp. KM1
Pathway
nif00300
Lysine biosynthesis
nif00470
D-Amino acid metabolism
nif01100
Metabolic pathways
nif01110
Biosynthesis of secondary metabolites
nif01120
Microbial metabolism in diverse environments
nif01230
Biosynthesis of amino acids
Module
nif_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
nif00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
W02_27720 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
W02_27720 (lysA)
Enzymes [BR:
nif01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
W02_27720 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BCA55632
UniProt:
A0A679I2H7
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Position
2896197..2897459
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AA seq
420 aa
AA seq
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MHNFEYRHGELYCEDVPVSRIAKEVGTPCYIYSHATLIRHIRAYDQAFKSIPHVMAFAMK
ANSNLAILRLMAKEGSGVDIVSGGELFRALKAGVPPAKIVFAGVGKSAEEIRDALNADIL
MFNVESPAEIQAIHDVASSMKKKARIALRINPDIDPKTHPYISTGLKKSKFGIAADRALE
EFKQAASLTHVEVVGVHAHIGSQLTEVSPFVESLKKVLGLVEALKGQGINIRYLNIGGGL
GITYSDEKPPLPRDLADAISPQLKGLDITLVMEPGRVIVGNAGILVTKALYEKVGEAKRF
IIVDAAMNDLIRPSLYSAYHDIRPVSEVIMQRARHTVDVVGPVCESGDFLAKDRMLPEMK
PGDLLAVMSAGAYGFVMASNYNSRPRVPEVLVKDGEVHVIRARETYDDLIRGEAVPAFLG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcataattttgaatatcgccacggcgaactgtattgcgaagacgtgccggtcagccgg
atcgccaaggaagtcggcacaccttgctacatctatagtcatgcgaccctcatccggcat
atccgagcctacgaccaggcattcaagagcatcccccatgtcatggcgtttgcgatgaag
gccaattccaatctggccatcctgagactcatggcaaaagagggaagcggtgtcgatatc
gtgtccgggggagaattgttccgcgcgctcaaagcaggggtgccaccggcgaagatcgtc
tttgcgggcgtcggcaaaagcgccgaagagattcgcgatgcgctgaacgccgatatccta
atgttcaatgtcgagtcaccagccgagatccaggcgatccacgacgtagcatcttccatg
aagaagaaggctcggatcgcactgcggatcaatcctgacatcgatccgaagacccatcct
tacatctccaccggtttgaagaaaagcaagttcgggatcgcagccgaccgcgcgttggaa
gaatttaaacaggctgcctcgcttacgcatgtcgaggtggtgggtgtccatgcgcatatc
gggtcacaattgaccgaggtatccccgtttgtcgaatcgctgaagaaggtgctcggtctc
gtcgaagcactcaaaggacagggaatcaatatccgctacctcaatatcggcggcggatta
gggattacgtattcagacgagaaaccgccgttgccccgggatctcgccgatgccatctcg
cctcagctcaaagggttggatatcacgttggtcatggagcccggccgcgtcatcgtgggg
aatgccggcatccttgtcaccaaagccctatacgaaaaggtcggcgaagcgaaacgattt
atcatcgtcgatgctgcaatgaacgacttgatcagaccgagcctctacagtgcctatcac
gacattcgacccgtctctgaggtaatcatgcagcgtgcgcggcataccgtcgatgtcgtc
ggacccgtctgtgagtcgggagatttccttgccaaggaccgcatgcttccggaaatgaag
ccgggcgatctgttggcggtcatgagcgctggcgcgtatggattcgtcatggcgtccaac
tataattcacggccgcgagtgcctgaagtgctcgtgaaggatggagaagtccatgtcatc
cgcgcgcgcgaaacgtatgacgatttgatccgaggtgaagcggttcccgcattccttgga
tag
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