Nitrospira sp. KM1: W02_28160
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Entry
W02_28160 CDS
T08344
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
nif
Nitrospira sp. KM1
Brite
KEGG Orthology (KO) [BR:
nif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nif03016
]
W02_28160 (truD)
Enzymes [BR:
nif01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
W02_28160 (truD)
Transfer RNA biogenesis [BR:
nif03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
W02_28160 (truD)
Prokaryotic type
W02_28160 (truD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
BCA55676
UniProt:
A0A679HXM0
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Position
2935852..2936895
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AA seq
347 aa
AA seq
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MTPEPLPYLTDGWEGIGGRARVLPEDFRVDERPLYFPCGEGEHLYVRITKRLLSTPDLIR
KISSSIGMKVQAIGTAGLKDARAVTSQMVSLQGTTPDRLSRLKLDEQVLSVEVLGRHRNR
LRPGHHAGNRFRLVLRDVAAHAPEAVPAVLEQLARRGVPNYFGPQRQGKEGNNFRLGAAL
LNDPVRRNSMSKAKRLWYLNSFQSHLFNQILARRISRLDQVLQGDWAMKHENGACFPVED
ALKEQPRADRFEISPTGILFGSRVSWATGEPGDCETAVAELNGTAPEHLITASKSCGLRG
ERRALRVAMTDLDWTLLDSQLTLTFTLPPGAYATNVLRELMKSSAPV
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgactccagagccactaccgtacctgacagatggatgggaaggtatcggcgggcgcgcg
cgggtattgccggaggactttcgagttgacgagcggccgttgtatttcccctgcggagag
ggcgagcatctgtatgtcaggatcaccaagcggctgctgtcgacccccgacttgatccgg
aagatctcttcctcgatcggcatgaaagtgcaggcgatcggcacggcgggtctgaaggat
gcgagggcggtgacaagccagatggtctctcttcagggaacgactcccgaccggctttca
cggcttaaactcgatgagcaggtcctttcggtagaagtcctgggacggcatcggaaccgt
ttgcggccggggcatcatgccggtaatcgattccgcctcgttcttcgcgatgtcgcggct
catgcgccggaggccgttccggccgtgttggaacagttggctcgcagaggggtcccgaat
tatttcggcccccaacgccaagggaaagagggaaacaatttccgtctaggagcagcgttg
ttgaacgaccccgtcaggcggaacagtatgagcaaagcgaaaagactctggtatctgaac
tcttttcaatctcatttgttcaatcagatcctggctcgccggatcagccgtctcgatcaa
gttcttcaaggcgattgggccatgaagcacgagaatggagcctgttttccggtagaggat
gctctcaaggaacaaccgagagcggaccgcttcgagatcagtccgacgggcatcctgttc
ggctcccgagtttcttgggcgaccggagaaccaggggactgcgaaacggcggtcgctgaa
ttgaatggtacggcgccggagcatctgattaccgcgtccaaaagctgcggtcttcgaggc
gaacgacgagccctcagggtggcaatgaccgatctggactggactttgctggattcacag
ctcacgttgacctttaccctgcctcccggtgcgtatgccaccaacgtgttacgcgaactg
atgaaaagctctgcaccggtctaa
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