Nitrospira sp. KM1: W02_29150
Help
Entry
W02_29150 CDS
T08344
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
nif
Nitrospira sp. KM1
Pathway
nif00541
Biosynthesis of various nucleotide sugars
nif01100
Metabolic pathways
nif01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
nif00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
W02_29150 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
nif01005
]
W02_29150 (rfaD)
Enzymes [BR:
nif01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
W02_29150 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
nif01005
]
Core region
W02_29150 (rfaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_8
KR
Motif
Other DBs
NCBI-ProteinID:
BCA55775
UniProt:
A0A679I262
LinkDB
All DBs
Position
3043856..3044869
Genome browser
AA seq
337 aa
AA seq
DB search
MLVTGGAGFIGSALIWGLNRQGCTDIVVVDRLRHTDKWRHLVPLRFRDYVEAEDFLARLQ
DGELGTFDIVLHLGACSSTTERDATYLVRNNFEFTKALARTSLATNARFLYASSAATYGN
GAAGMSDTEPDLDGFSPLNAYGFSKHLFDRHAWRNGWLDHIVGLKYFNVFGPNEDHKGDM
RSMVHKATVQLQETGTIRLFKSYRPDYKDGEQQRDFLYVKDAVAMTLHLATRTGANGLFN
IGSGTTHTWNELAAAVCRALKRETAIEYIDMPEDLRPRYQYFTKADIGKLRGSGFSDALT
PFESAIHDYATNYLLRDRYLGSPVSSASGLEIDRGTP
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
gtgctggtgaccggtggtgccgggttcatcggcagcgctctcatttggggtctcaatcga
cagggatgcaccgacatcgttgtcgtcgatcggttgcgccacaccgacaaatggcgtcat
ctcgttcctttgcgatttcgggattatgtggaggcggaggacttcttagcccgtttgcaa
gacggggagcttggaacattcgacatcgtgctgcacctcggcgcatgctcgtcaaccacc
gaacgggacgcgacctatctggtccgcaacaattttgaattcaccaaagcgttggcccga
acttcattggcgaccaatgcgcggtttctctatgcgtcatcggcggcgacgtatggtaat
ggggcggcagggatgagcgataccgagccagatctggacggattcagcccgctcaatgca
tatggcttttccaagcacctcttcgaccgacacgcatggaggaacggctggctcgaccac
atcgtcgggttgaaatacttcaacgtcttcggccccaacgaagatcataaaggcgatatg
cgcagcatggttcacaaggccactgtgcaactgcaggagacaggaaccatccggctcttc
aaaagctatcgtcctgactacaaggatggcgaacaacagcgggactttctctatgtgaag
gacgccgtggcgatgacattgcacctggcgacgaggacgggcgcgaacgggttattcaat
atcggatccggtacgactcatacctggaacgagttggccgcagccgtctgtcgggctctg
aaacgggaaacggccatcgaatatatcgacatgccggaggatctacggccccgatatcaa
tatttcacaaaggcggatattggaaaattgcgtggcagcggattttctgatgcattgaca
ccgtttgagtcagccattcatgactatgcaacgaactatctgctgcgggaccgctacttg
ggatcgcccgtttcttcagcttccggtctcgagatcgaccggggcactccctga
DBGET
integrated database retrieval system
