Nitrospira sp. KM1: W02_32320
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Entry
W02_32320 CDS
T08344
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
nif
Nitrospira sp. KM1
Brite
KEGG Orthology (KO) [BR:
nif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
nif03051
]
W02_32320 (pafA)
Enzymes [BR:
nif01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
W02_32320 (pafA)
Proteasome [BR:
nif03051
]
Prokaryotic proteasome
Bacterial regulatory particles
W02_32320 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
BCA56092
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Position
3374823..3376307
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AA seq
494 aa
AA seq
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MLNRIFGLETEYGLLVHQDRPEHSPTWFAHKLRDHIFHVQRQGVLDLHHRGHDEPPGNGG
FITNAGRIYLDMGHLEYASPECQSLTDVVATDRAGDAIIQQAIDDLDLGEQVSLIKNNVD
HETDATFGSHENYLVSRRFPFTRRGLAPLVTFLVTRQIFTGSGRVGAANPQDAWIQMDRL
IVPRGAMGHRPDIIRLPFQISQRADHIVNDFFEWVQQNRAIVNTRDEPLADPNQYRRIHL
LLGDSNMAEYATALKMGTTGLVLQLIEDGKAPRDIELDEPVETLQEISQDQERRWLVRLM
SGTTISAIDVQERFLEAAKAHCMGQDEETDWVLQQWEVVLQDLRGSYDRLVGRIDWASKL
WLLESFREAEQLEWNDPMLKSLDLEYHNLNPGKGLYYGLLEEGRVPRLTTDKAIALAMNH
PPRNTRAFGRGELVRHLVACGPPAEPEDSKVEERFFPSYVINWSIFQLRGQAPFPMADPF
KTYAQEVRSHLSIA
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgctgaatcgaatcttcggcctcgagacggaatatggtctcctggtccatcaagaccgt
ccggagcattcgccgacctggtttgcgcacaaacttcgcgaccatatctttcacgtgcag
cggcagggcgtgctggacctccaccatcgggggcatgacgagcctcccggcaacggaggc
ttcattaccaatgccggccggatctatctcgacatggggcatctggaatatgcgtcgccg
gaatgccaatcgttgacggatgttgtggcgacggatcgtgcaggtgacgcgatcatccag
caggcgatcgacgatttggacctgggcgagcaggtctcattgatcaagaacaatgtcgat
catgagaccgatgccacgttcggctcacatgaaaattatctcgtatcgcggcgatttccg
tttacacggcgtgggctcgcccccctggtgacctttctggtcaccagacaaattttcacc
ggctccggtcgtgttggcgcggccaatccacaggatgcctggatccaaatggaccggctg
atcgtgccccgcggagccatggggcaccgcccggatatcatccggctgccatttcagatt
tcacagcgcgccgaccacatcgtgaatgatttcttcgagtgggtgcagcagaatcgggcc
atcgtcaatacgagggacgaaccgctggctgatccgaatcagtaccggcggattcatttg
ctcctcggcgactccaacatggccgagtacgcgacggcgctgaaaatgggcacgaccggt
ctggtcttgcagttgatcgaagacggaaaagctccgcgcgacatcgagctggatgaaccg
gtggagacattgcaggagatttcacaggatcaggaacggcgatggctggtccgcctgatg
tctggaaccacgatttccgcaatcgacgtgcaggagagatttcttgaggcggcaaaggcc
cactgtatgggacaggacgaagagacggattgggtgcttcagcagtgggaggtggtgttg
caggacttgcgcggctcctatgaccggctcgttggcaggatcgactgggcctccaaactc
tggctcttggagtccttccgcgaggcggaacagctcgagtggaatgatccgatgctgaaa
agcctggatttggagtatcacaatctgaatcccgggaaaggtttgtactatggcttgttg
gaagagggccgcgtaccccgtctcacgacggacaaagccattgcactggccatgaatcat
cctccacggaacacgcgggcgtttggccgcggggaactcgttcgtcatctggtggcgtgc
ggacctcccgccgaaccggaagattccaaggtcgaggagcgtttctttccgtcctacgtc
atcaactggtcgatttttcagttgcgagggcaggcaccgtttccaatggcggatccgttc
aaaacgtatgcccaggaagtgcgcagccacctttcgatcgcatga
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