Nitrospira sp. KM1: W02_33420
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Entry
W02_33420 CDS
T08344
Symbol
thiC
Name
(GenBank) thiamin biosynthesis protein
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
nif
Nitrospira sp. KM1
Pathway
nif00730
Thiamine metabolism
nif01100
Metabolic pathways
nif01240
Biosynthesis of cofactors
Module
nif_M00896
Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
nif00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
W02_33420 (thiC)
Enzymes [BR:
nif01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
W02_33420 (thiC)
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Ortholog
Paralog
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
BCA56202
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All DBs
Position
complement(3487514..3489424)
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AA seq
636 aa
AA seq
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MSDHTQQNGSTRNGNSPGQSTLTTEPFPASKKVHVVGTRAGVRVPMREISLSPTRPMNGG
TPLPNEPITVYDTSGPYTDPSATIDIRAGLAPTRHEWILSRGDVEQLSDVTSQYGQLRAA
DPKLADVRFQHIRKPLRAKPGLNVTQIHYARKGIVTPEMEFIAIRENQSREIARELASRN
GHGGGTVQHPGQAWGAGMPKAMTPEFVRDEVARGRAIIPANINHPETEPMIIGRNFLVKI
NSNIGNSAVASSIEEEVEKMIWSIRWGADTVMDLSTGKNIHETREWIIRNSPVPIGTVPI
YQALEKVGGKAEDLTWEIYRDTLIEQAEQGVDYFTIHAGVRLGYVPMTARRMTGIVSRGG
SIHAKWCLAHHQENFAYTHFEDICEIMKAYDVSFSLGDGLRPGSIADANDEAQFAELETL
GELTKIAWTHDVQVMIEGPGHVPMHMIQVNMEKQLKECQEAPFYTLGPLTTDIAPGYDHI
TSGIGAAMIGWYGCAMLCYVTPKEHLGLPDREDVKTGVVTYKIAAHAADLAKGHPGAQIR
DNALSKARFEFRWEDQFHLSLDPDTAKQFHDETLPDNAAKVSHFCSMCGPHFCSMKITQD
VREYAAAKRVREDQAIQIGMKEKAEEFKKTGAEIYR
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatcacacacaacaaaatggttcaacgcgtaacggaaattctcccggacagagc
acgctaaccaccgaaccgtttccggcatcgaaaaaggtgcacgtcgttgggacgcgagcc
ggtgtgcgagtccccatgcgtgaaatcagcttgagtccgacccgccccatgaacggcgga
acaccccttccgaacgagccgatcaccgtatacgacacgtcaggcccctacaccgatccc
tcggcgaccatcgacatcagggctgggctcgcccccaccaggcacgaatggattctttca
cgcggcgatgtcgagcagctctcagacgtgacctcgcagtacggccagttacgcgcggcc
gacccgaaactcgcagacgtccgttttcagcacattcgcaaaccgcttcgcgcaaaacca
ggattgaatgtcactcaaattcactatgcgcgcaaaggcatcgtgactccggaaatggaa
tttatcgccatccgggaaaaccaatcacgcgagatagcccgcgagcttgcatcgagaaac
gggcacggcggcgggacggttcaacatcccggccaggcctggggcgccggcatgccgaag
gcgatgacgccggagttcgtccgcgacgaagtggcgcgcggccgggcgatcattcccgcc
aatatcaatcatcctgaaaccgaaccgatgatcatcggccggaattttctcgtgaagatc
aattcgaacatcgggaattcggcagtcgcctcatccatcgaagaagaagtcgaaaagatg
atctggtccatccgatggggcgccgatacggtcatggatctctcgacggggaagaacatt
cacgaaacgcgggaatggatcattcgcaactctccggttcccatcggcaccgtacctatt
tatcaggctctcgaaaaggtgggagggaaagcggaagacctgacctgggagatctatcgt
gacacgttgatcgaacaggcagaacagggagtggattacttcaccatccatgccggtgtc
cgcctgggctatgtgccgatgacggcacggcgaatgaccggaatcgtctcccgaggcgga
tccatccatgccaagtggtgcctcgcgcatcatcaagaaaacttcgcctatacacacttc
gaagacatctgtgaaatcatgaaagcctacgatgtgtcgttcagcctcggagacggattg
cggcccggctcgatcgcggacgccaacgatgaggcgcagttcgcggaactcgaaaccctg
ggcgaattgaccaaaatcgcctggacacatgacgtgcaggtcatgatcgagggacccggc
catgttcccatgcacatgatccaggtcaacatggagaaacagttgaaagagtgccaggag
gcgccgttttataccctcgggcctctcaccacggatattgcaccgggatacgatcacatc
acatcaggcattggcgcagcgatgatcggatggtacggctgcgccatgctgtgctacgtc
actccgaaggaacacctgggattgcccgaccgggaagacgtcaagactggtgtcgtcacc
tacaaaatcgccgcgcacgccgccgacctggccaagggtcatcccggcgcgcagatccgt
gacaacgccctctcgaaggctcgattcgagttccgatgggaggatcagttccacctgtca
ctcgacccggacacggccaaacaatttcacgatgagacccttcccgacaacgcggcgaag
gtctcgcacttctgcagtatgtgcggaccgcatttctgttccatgaaaatcacccaggac
gtgcgtgaatatgcggccgccaagcgcgttcgtgaagaccaggcgatccagattggcatg
aaggaaaaagcggaagaattcaagaaaaccggagcggaaatctatcggtag
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