Nitrospira sp. KM1: W02_35250
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Entry
W02_35250 CDS
T08344
Name
(GenBank) Farnesyl-diphosphate farnesyltransferase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
nif
Nitrospira sp. KM1
Pathway
nif00100
Steroid biosynthesis
nif00909
Sesquiterpenoid and triterpenoid biosynthesis
nif01100
Metabolic pathways
nif01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
nif00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
W02_35250
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
W02_35250
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
nif01006
]
W02_35250
Enzymes [BR:
nif01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
W02_35250
Prenyltransferases [BR:
nif01006
]
Terpene biosynthesis
Squalene/phytoene synthase
W02_35250
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GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
BCA56385
UniProt:
A0A679I3X2
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Position
3686445..3687434
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AA seq
329 aa
AA seq
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MSRLFYTTLAVVPSDVRDQVGLAYLFARAADTIADTDLIDRPRRLDYLARLRSQFTSDDI
SWTEVREIQQAVAPLQRDSAELTLLERLDDCFRLFLDFFPDDRRRVRRLMATLTQGMEMD
LTVFPGQSVGELVALKTADELDRYTYYVAGCVGEFWTDLMCAHRKALSSWDIAQMSETGV
RFGKGLQLTNILKDISHDLRKGRCYIPETMLSEAGLKPADLLDAQCLPALRPVLRKLART
AVEHLDQGWAYTMSVPRHEIRLRLSCMWPILSAGESLKLIMNAPDLLDPSVKVKIPRNKV
YQIIALTMLTGACGYVGTAYWGQLRKYII
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
gtgtcacgcctgttttatacgacgttagccgttgtgccatcggacgtgcgggatcaggtc
ggtctcgcctatctgttcgctcgcgcagccgacacgatcgcggacaccgatctcatcgat
cggccgagacggttggactacctggcccgcctcagatcgcaatttaccagcgatgacatt
tcctggacggaagtacgcgagattcaacaagccgtcgcgcccttgcaacgtgattctgcc
gaactcactctactcgaacggctggacgattgtttccgcctctttctggactttttcccg
gacgacagacgtcgagtgcggcgtttgatggcgacgctgacccagggcatggaaatggat
ttgaccgtgttccccggccaatcggtcggagaactcgttgcgctgaagacagccgatgaa
ctcgaccgctatacctactacgtggcgggatgcgtcggagaattttggaccgatctcatg
tgcgcgcaccgaaaagcgctgtcatcgtgggacatcgcgcagatgtcggaaactggcgta
cgctttggcaaaggattgcagctcacgaacatcctgaaggacatttcccatgaccttcgg
aaagggcgttgttacatacccgaaaccatgctctctgaagccggtctgaagccggcagac
ttgctggatgcacagtgcctacctgccctgcgccccgtgctgcggaagctggcccgaacg
gccgtcgagcatcttgatcaaggatgggcgtatacgatgagcgttcctcgacatgagatc
cgcctgcgactttcctgtatgtggccgatattgtcggccggtgaatcgctcaagctgatc
atgaatgctccggatttgctggacccgtcggtcaaggtcaagattccccgaaacaaggtg
tatcaaatcattgcgttgacaatgttgaccggcgcatgtgggtacgtcggcaccgcgtat
tggggacagttgcgcaagtacatcatctag
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