KEGG   Nitrospira sp. KM1: W02_38960
Entry
W02_38960         CDS       T08344                                 
Symbol
lptB
Name
(GenBank) putative lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily
  KO
K06861  lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
Organism
nif  Nitrospira sp. KM1
Pathway
nif02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:nif00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    W02_38960 (lptB)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:nif02000]
    W02_38960 (lptB)
Enzymes [BR:nif01000]
 7. Translocases
  7.5  Catalysing the translocation of carbohydrates and their derivatives
   7.5.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.5.2.5  ABC-type lipopolysaccharide transporter
     W02_38960 (lptB)
Transporters [BR:nif02000]
 ABC transporters, prokaryotic type
  ABC-2 type and other transporters
   Lipopolysaccharide transporter
    W02_38960 (lptB)
 Other transporters
  Pores ion channels [TC:1]
   W02_38960 (lptB)
SSDB
Motif
Pfam: ABC_tran AAA_21 SMC_N AAA_29 AAA_23 BCA_ABC_TP_C DO-GTPase2 SbcC_Walker_B NMT1_2 NB-ARC
Other DBs
NCBI-ProteinID: BCA56756
LinkDB
Position
4054261..4055043
AA seq 260 aa
MTNVHLMPVMALRPEGSVAPKSILRADGLVKSFRSRKVVKGVSVEVHAGEVVGLLGPNGA
GKTTIFDMMVGLTQPDEGTITFDQETLTDLPMFKRARKGIGYLPQESSVFRRLSVEDNIV
AILEMLNYSRVERAERVELLLKELDLGHIRASMAYALSGGERRRLEITRALATNPSFMLL
DEPFAGIDPIAVADIQQIITRLKEKGIGILITDHNVQETLSITDRAYIINEGKILEAGAP
ADIVKSETARAVYLGERFKL
NT seq 783 nt   +upstreamnt  +downstreamnt
gtgacgaacgtgcatctgatgccggtcatggctttgcgcccagagggaagcgttgctcca
aaatcgattctgagagcggatggtctcgtcaaaagctttcgctccagaaaggttgtgaaa
ggcgtgtcggtagaggtccacgccggtgaagtcgtcggcctattaggaccgaatggggcg
gggaagacgacaattttcgacatgatggttggattgactcagccggacgaaggaacgatt
accttcgatcaggaaacgttgaccgatttgcccatgtttaagcgcgcgcgaaaggggatc
gggtacctcccgcaagagtcttccgtattccgccgactatcggtggaggacaatattgtc
gcaattcttgaaatgctcaactattctcgtgtcgagagggctgaacgcgtggagttgctg
ctgaaagaattagatctgggccatatccgggcaagcatggcgtatgccctatctggaggt
gaacgccggcggttggaaattaccagagcattggccaccaatccctccttcatgctgctg
gacgagccatttgccggcatcgatcctatcgcagtggcagacattcagcagatcattacc
cgtctgaaagagaaaggcattggaattctgatcactgaccacaatgttcaggagaccctt
tcgatcactgatcgagcgtatatcattaacgagggcaagatcttagaggccggtgcacca
gcagacatcgtgaagagtgagaccgcccgcgccgtgtatttgggcgaacgatttaaattg
tag

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