Nitrospira sp. KM1: W02_41010
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Entry
W02_41010 CDS
T08344
Symbol
fadD
Name
(GenBank) Long-chain fatty acid-CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
nif
Nitrospira sp. KM1
Pathway
nif00061
Fatty acid biosynthesis
nif00071
Fatty acid degradation
nif01100
Metabolic pathways
nif01212
Fatty acid metabolism
nif02024
Quorum sensing
nif04146
Peroxisome
Module
nif_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
nif00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
W02_41010 (fadD)
00071 Fatty acid degradation
W02_41010 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
W02_41010 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
W02_41010 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
nif01004
]
W02_41010 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nif04147
]
W02_41010 (fadD)
Enzymes [BR:
nif01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
W02_41010 (fadD)
Lipid biosynthesis proteins [BR:
nif01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
W02_41010 (fadD)
Exosome [BR:
nif04147
]
Exosomal proteins
Exosomal proteins of breast milk
W02_41010 (fadD)
Exosomal proteins of breast cancer cells
W02_41010 (fadD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
BCA56961
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All DBs
Position
4271696..4273354
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AA seq
552 aa
AA seq
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MPEQAWVSHYPAGVPRELPLIPETLPDMLAHSARRFSRRPALYFFGKTLSYHECHVTVER
FACGLAALGIRKGDRVALCLPNSPQAVIAYFGILRAGGIVVACNPTYTEHELSHQLRDAG
ARALIVLDQMYQKVHHLDLELIIVTSITDFMTTIARYLYHHRHGNRPVEIPLGGTTIAFQ
DILHQVTPVEPERLPVVTPDDIAVLQYTGGITGISKGAELRHRNLTANIRQLVSWFSPAE
RVESFLAALPLFHVFGMTVTQNICLAVGGSIILVPDPRNMPVLLTLLRKTRPTVITLVPA
FVRKLLDHCDAQDFTETKFVICGGAALSYELLKEFKDRTGHLIVEGYGLSEASPVTHCNI
PRGLSVKRSIGLPICNTDAKIVDEAGREVKEGEVGELWVRGPQVMEGYWNNPAETASVVK
PGGWLATGDIARVDQDGFFYVVDRKKDMILSTSGFNVYPAEIEQALLLHPLVSEAAVIGV
QAGDGSEAIKAFVVPKANSITADDLLTHCRQYLAAYKVPKKIEFRTELPRSILGKMLHRV
LRGEERTQLQGS
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacaagcttgggtgtcgcattacccggccggagtcccccgcgaactgccattg
attccggagacgcttcccgacatgcttgcccacagtgcacgacgcttttcacgccggccc
gctctctattttttcggaaagaccctgtcctatcacgagtgccatgtcaccgtagagcgc
tttgcctgcggcttggcggcactgggcattcgaaaaggcgaccgggtcgccctctgcctt
cccaactctccgcaggctgtcatcgcgtatttcggcatcctgcgcgcggggggcatcgtc
gtcgcgtgcaacccgacctatacagaacatgaactgtctcatcagcttcgcgacgcaggc
gcgagggcactcatcgtgctcgaccagatgtaccagaaggtccatcatctcgatctcgaa
ctgatcatcgtcacgagcattacggatttcatgaccaccatcgccaggtatctgtaccat
catcggcatggcaaccgtcctgtcgagattccattgggcggtactacgattgccttccaa
gacatactgcaccaggtcacgccggtcgagcctgagcgtcttccagtggtcactcctgat
gatattgcggtcctgcaatacaccgggggcatcaccggcatttcgaaaggtgccgagttg
cggcatcgcaatctgactgcgaatatccggcaactggtcagttggttctctcccgccgaa
cgggtggaaagttttctcgccgcgcttccgttgtttcacgtgttcggaatgaccgtaacg
cagaacatttgtctcgcggtcggcgggagcatcatcctggtacccgatccgcgcaatatg
cccgtgctgctgaccctccttcgtaagacacggccgaccgtgatcacgctggtgccggcc
ttcgtccgcaagttgctcgaccattgtgacgcccaggactttaccgagaccaaattcgtg
atttgcggcggagcggctctttcctacgaactgttgaaggagttcaaggaccggacaggg
catttgatcgtagaaggttacggactttccgaagcgtcccccgtgacgcattgcaacatt
cccagaggcctgtcggtgaagcgctccatcggattgcccatctgcaataccgacgcaaag
attgtcgacgaagcaggacgcgaggtgaaggagggagaggtcggcgaactctgggttcgt
ggtcctcaggtcatggaaggctactggaataatcctgccgaaacggccagcgtcgtgaaa
ccgggagggtggctggcaaccggagacattgcccgagtcgatcaggatggattcttctac
gtcgtggaccggaagaaagacatgatcctctccacctcggggttcaatgtctatccggcc
gaaatcgagcaggcgctgctcctccatcctctcgtcagcgaggctgccgtgatcggcgtc
caggccggagacggcagcgaagcgatcaaggcctttgtcgttccgaaggcgaactcgatc
acggccgacgacctgctcacgcattgccggcagtatcttgctgcgtacaaggttcccaag
aagatcgaattccgtacagagttgccccgttcgattcttgggaaaatgcttcatcgggta
ctgcgtggagaggaacggacccaattgcaaggctcctag
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