Nissabacter sp. SGAir0207: C1N62_01465
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Entry
C1N62_01465 CDS
T09781
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
nig
Nissabacter sp. SGAir0207
Pathway
nig03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nig00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C1N62_01465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nig03021
]
C1N62_01465
03400 DNA repair and recombination proteins [BR:
nig03400
]
C1N62_01465
Enzymes [BR:
nig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C1N62_01465
Transcription machinery [BR:
nig03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C1N62_01465
DNA repair and recombination proteins [BR:
nig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C1N62_01465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
QCR34849
UniProt:
A0A4P8SF46
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All DBs
Position
322093..323082
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AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGD
VEIVKPQHIICHLTDENAAISMRIKVQRGRGYVPASARIHSEEDERPIGRLLVDACYSPV
ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagagtttctaaaaccgcgcctggtagatatcgagcaagtcagt
tcgacgcacgccaaggtgacccttgagccgttagagcgtggctttggccatactcttggc
aacgcactgcgccgtattctgctttcatccatgccgggttgcgcggtgaccgaggttgag
attgatggtgtactacatgagtacagcaccaaagaaggcgtacaggaagatatcctggag
atcctgctcaacctgaaagggctggcggtgagagttcaaggcaaagatgaagttattctt
accctgaataaatctggcattggccctgtgactgcagccgacatcacccatgatggtgat
gtcgaaatcgtcaagccgcaacatattatctgtcatctgaccgatgagaacgctgctatc
agcatgcgtatcaaggttcagcgtggccgtggatatgtgccggcgtctgcccgaattcat
tcggaagaagatgagcgcccgatcggtcgtctgctcgttgacgcctgctacagccctgta
gagcgtatcgcctacaatgttgaagcagcgcgtgttgagcaacgtactgacctggataag
ctggtcatcgagatggaaaccaacggtacgatcgatcctgaagaggcgatccgtcgtgcg
gcgaccattttggctgaacaactggaagctttcgttgacttacgtgatgtacgtcagccg
gaagtgaaagaagagaagcctgagttcgatccgatcctgctgcgccctgttgacgatctg
gaattgactgtccgctctgctaactgcctcaaggcagaagctatccactacatcggtgat
ctggtacagcgtaccgaggttgagttgctgaaaacgccaaacctgggtaaaaaatctctt
actgagattaaagacgtgctggcctcccgtggtctgtctctgggcatgcgcctggaaaac
tggccgccggcaagcattgctgacgagtaa
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