Nissabacter sp. SGAir0207: C1N62_02100
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Entry
C1N62_02100 CDS
T09781
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
nig
Nissabacter sp. SGAir0207
Pathway
nig03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C1N62_02100 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nig03019
]
C1N62_02100 (pnp)
03016 Transfer RNA biogenesis [BR:
nig03016
]
C1N62_02100 (pnp)
Enzymes [BR:
nig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
C1N62_02100 (pnp)
Messenger RNA biogenesis [BR:
nig03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
C1N62_02100 (pnp)
Transfer RNA biogenesis [BR:
nig03016
]
Prokaryotic type
tRNA degradation factors
C1N62_02100 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
KH_2
OB_RRP5_4th
aRib
S1_RRP5
KH-I_KHDC4-BBP
UPF0181
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
QCR37773
LinkDB
All DBs
Position
460327..462444
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AA seq
705 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGAKKAKPGQDFFPLT
VNYQERSYAAGRIPGSFFRREGRPSEGETLTSRLIDRPIRPLFPEGFLNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGSARVGYINDQYVLNPTTDELKQSKLDLVVA
GTQGAVLMVESEADLLSEDQMLGAVVFGHDQQQVVIENINALVAEAGKAKWDWQPEAVNE
ALHARVAELAESRLGDAYRIIDKQERYGQVNTIKADVAAALLAQDESLDEGEIMDVLGTI
EKNVVRSRVLRGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQNLDELMGERTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPEADS
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGENFVVLSD
ILGDEDHLGDMDFKVAGSREGITALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQA
ISTPRGDISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGDKAKYAIRRIEEITAEIEVGRIYQGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLEMGQEVPVKVLEVDRQGRVRLSIKEATAQSTEAAAPEAE
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaatccgatcgtacgcaaattccaatacggccagcacaccgttacgctggaaacc
ggcatgatggcgcgccaggcaacggctgccgttatggtcagcatggatgacaccgctgtc
ttcgtgaccgtggttggcgccaagaaagctaaaccgggtcaggacttcttcccgctgacc
gtcaactaccaagagcgcagctacgctgccggccgtatccctggtagcttcttccgtcgt
gaaggccgtccgagcgaaggtgaaaccctgacctcccgcctgattgaccgcccaatccgt
ccgctgttcccggaaggcttcctgaacgaagttcaggttatcgcgaccgtggtttccgtg
aacccacaggttaacccggacatcgttgccatgatcggtgcctctgcggccttgagcctc
tctggcatcccgttcaacggcccgattggttccgcacgcgtgggttacatcaatgaccag
tatgtcctgaacccgaccactgatgagctgaagcagagcaaactggatctggtggttgcg
ggtacccaaggcgcggtactgatggtggaatccgaagcggatctgctgagcgaagaccag
atgctgggcgctgtggtcttcggccacgaccaacagcaggtagtgattgagaacatcaac
gcactggttgctgaagcaggcaaagcgaagtgggactggcagccggaagcggtgaacgaa
gccctgcacgcccgtgtggcggagctggctgaatcccgtctgggtgatgcctaccgcatc
atcgacaaacaagagcgctacggccaggttaataccatcaaggctgacgttgctgctgct
ctgctggcacaagatgagtcgctggacgaaggcgagatcatggatgtgctgggcaccatc
gagaagaacgtcgtacgtagccgtgtgctgcgtggcgagccgcgtatcgatggccgcgag
aaagacatgatccgtggtctggacgtgcgcaccggcgtactgccgcgtacccacggctcg
gcgctgttcacccgtggcgaaactcaggcgctggtaacggccactctgggtaccgcacgt
gatgcgcagaacctggatgagctgatgggcgagcgcaccgacagcttcctgttccactac
aacttccctccgtactccgtaggtgaaaccggcatggtcggctcaccgaagcgtcgtgag
attggccacggccgtctggcgaagcgtggcgtgctggcagtgatgccggaagcagactcc
ttcccgtacaccgtacgtgtggtatctgagatcaccgaatccaacggctcctcctccatg
gcgtccgtgtgtggtgcttctctggcactgatggacgctggcgtgccgatcaaagccgct
gttgcgggcatcgcgatgggtctggtgaaagagggtgaaaactttgtggttctctctgac
attctgggtgacgaagaccacctgggtgacatggacttcaaagtggcaggcagccgtgaa
ggcatcaccgccctgcagatggacatcaaaatcgaaggcattacccgcgaaatcatgcag
gttgccctgaatcaggccaaaggtgcgcgtctgcacatcctgggcgtgatggagcaggcc
atcagcaccccgcgtggtgatatctctgaattcgcaccgcgcattcacaccatcaaaatt
aatcctgataaaatcaaggatgtgattggcaaaggcggctcggtaatccgtgcgctgacc
gaagagaccggcaccaccatcgaaatcgaagatgatggcaccgtgaagatcgcagcgacc
gacggtgacaaagcgaaatacgctatccgtcgtatcgaagagatcaccgctgagatcgaa
gtgggccgtatctaccagggtaaagtaacccgtatcgttgacttcggtgccttcgtggcc
atcggcggcggtaaagagggtctggtacacatctctcaaatcgctgataagcgcgttgag
aaagtgaccgactacttggagatgggtcaggaagtgccagtgaaagtactggaagttgat
cgtcagggccgtgtccgcctgagcatcaaagaagcgactgcccagtctacagaagcggct
gcgcctgaagcagaataa
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