Nissabacter sp. SGAir0207: C1N62_02260
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Entry
C1N62_02260 CDS
T09781
Name
(GenBank) cyclic di-GMP phosphodiesterase
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
nig
Nissabacter sp. SGAir0207
Pathway
nig02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nig00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C1N62_02260
Enzymes [BR:
nig01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
C1N62_02260
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
QCR34988
LinkDB
All DBs
Position
complement(507584..509572)
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AA seq
662 aa
AA seq
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MIENQDSSILYQHFGTPRPYWRLHADSHALELSAEKNMTNVAVALTPYQASTIRGLTGIT
SSFTLEITLYGAPLRLHLVGRRVGAEEWAGTASDYYDTPSVAHDLEVGLSFAEQVVSEAN
SVIVIIDQEGKVQRFNRLSEEYTGVKEKDVIGKSAHDLFMSLEEGSASRQNISGFFQNKQ
SYEVERWINTVKGQRLFLFRNKFVHSGSGKQQTFLICSGTDITDERMAQEHLRILANTDT
ITGLPNRHAIMEKLKAALAVRGEQQVGIIYLDLDNFKKVNDAYGHMFGDQLLEEVSTALK
GCLSPNQTLARLGGDEFILLCENSSLEELEALAQQLHNLLKTPFRIGLIEVYTGCSCGLA
ICPDHGTSAESLIRNADTAMYVAKEQGKRTHRIFSPEMNYKVAEYMWLDTNLRKALEEEQ
LLLYYQPKIASSTGRVTGVEALVRWYSPERGLIQPIQFIPYAEESGLITPLGKWVLESAA
RQAMAWQQKGFDLRVAVNLSARQLSGDALITTFREAMQEVGMTDCLLDFELTESCLIDDE
RRAVSLIEQLHALGAEVYLDDFGTGYSSLSQLARIPIDYIKLDQSFVRGISENSVSQALV
RAIIAVAGTLNLKVVAEGVESAKEEQFVDEMGVHDKQGYFYAKPMPADELEHWLSDYNLL
HP
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaaatcaagacagttcgatcctgtaccaacattttggtacgccccgcccctat
tggcggctccatgcagacagtcacgcgctggaactctctgccgaaaaaaacatgaccaac
gtggcggtcgccctgacaccctatcaggcgtccaccatccgtggcctgaccggcattacc
tccagctttacgctggagatcacgctctatggcgcgccgctgcggctgcatctggtgggt
cggcgcgtcggcgcggaggagtgggcgggcaccgcctctgactactatgacaccccctcc
gtggcgcatgacctggaggtcggcctctcgttcgccgagcaggtggtatcagaggccaac
tcggtgatcgtgatcatcgatcaggaggggaaagtccagcgcttcaaccgcctcagcgag
gagtacaccggcgtcaaagagaaggacgtgatcggcaaaagcgcgcacgatctctttatg
tcactggaggagggatccgcctcgcgccagaacatctccggctttttccagaacaagcaa
tcctatgaggtggagcgctggatcaatacggtgaaggggcagcgcctgttcctgttccgc
aataagttcgtgcacagcggcagcggcaagcagcagaccttcctgatctgctccggcacg
gacatcaccgatgagcgcatggcacaggagcacctgcgcatcctcgccaacaccgacacc
atcaccggcctgcccaaccgccatgccattatggagaagctcaaggcggcgctggcggtg
cgcggcgaacagcaggtgggcatcatctacctcgatctggataacttcaaaaaggtgaat
gacgcctacggccatatgttcggcgaccagttgctggaggaggtctcgacggcgctgaag
ggctgcctctcgcccaaccagaccctggcgcggctgggcggcgatgagtttatcctgctg
tgcgagaacagctcgctggaggagttggaggcgctggcgcagcagctgcacaacctgttg
aagacgccgttccgcatcgggctgatagaggtctacaccggctgctcctgcgggctggcg
atctgcccagaccacggcaccagcgccgagagcctgatccgtaatgccgataccgccatg
tacgtcgccaaggagcagggcaagcgcacgcaccgcatcttctcaccggagatgaactac
aaggtcgcggagtatatgtggctcgacaccaacctgcgcaaggcgctggaggaggagcaa
ctgctgctctactaccagccgaagattgcctcgtccacgggccgggtgaccggcgtggag
gcgctggtacgctggtactcgccggagcgcgggctgatccagcccatccagttcattccc
tatgccgaggagtcagggctgatcacgccgctcggcaagtgggtgctggagagcgctgcc
cggcaggcgatggcgtggcagcagaagggctttgacctgcgggtggccgtcaacctctcg
gcgcgccagctcagcggcgacgcgctgatcaccaccttccgcgaggcgatgcaggaggtg
ggcatgaccgactgcctgctcgactttgaactgacggagagctgcctgattgacgatgag
cggcgggcggtctcgttgattgagcagctgcacgcgctgggcgcggaggtctatctggat
gatttcggcactggctactcttcgctctcgcagctggcgcgcatccctatcgactacatc
aaactcgaccagagcttcgtgcgcggcatcagtgagaacagcgtctcgcaggcgctggta
cgcgccattatcgccgtggcgggcaccctcaatctgaaggtggtggccgagggggtggag
agtgcgaaggaggagcagttcgtggatgagatgggcgtgcatgacaaacagggctatttc
tacgcgaagccaatgcccgcagacgagctggagcattggctgtcggactacaatttgctt
cacccataa
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