Nissabacter sp. SGAir0207: C1N62_03175
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Entry
C1N62_03175 CDS
T09781
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
nig
Nissabacter sp. SGAir0207
Pathway
nig03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C1N62_03175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nig03400
]
C1N62_03175
Enzymes [BR:
nig01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
C1N62_03175
DNA repair and recombination proteins [BR:
nig03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C1N62_03175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QCR35159
UniProt:
A0A4P8SFX8
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All DBs
Position
733774..737151
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AA seq
1125 aa
AA seq
DB search
MFTVYHSNHLDLLKKLIAALIEGQPLADPFEQEVILVQSPGMAQWLQMQLAEEFGIAANI
HFPLPATFIWEMFTRVLPGIPKESAFSKDAMTWKLMWLLPQMLPQPEFTALRHYLTDDGD
KRKIHQLAARVADLFDQYLVYRPTWLEGWQRGELQPDLGEAQQWQSVLWKRLCEYTESLN
QPTWHRANLYQRFISTLHQSAECPPGLPKRVFICGISALPPVYLQALQALGQHIDIHLMF
TNPCRYYWGDIQNYAFLAKLQSRKRRDYLARAEVDLFRDPEQAPQLFNQEGEQALTNPLL
ASWGKLGRDHMYLLSQVDEIQEVQAFVELEDDSLLHAVQRDMLELDDRAVLGMTPETLAS
SAGKRLLDPQDRSICIHACHSPQREVEVLHDKLLTMMAEDPSLTPRDIIVMVADIDSYAP
YIQAVFGNAPPERYLPFAISDRKASQAHPALQAFLSLLEMPQSRFTAEQVLALLEVPALA
SRFSIHEDGLRLLRLWVSESGIRWGLDDDAIRQLALPPTGQHTWRFGLTRMLLGYAMESE
AGHWQGVLPYDETTGLAAELAGHLAELLMQLTRWRSLLAESRPLADWLPLCRQMLDTFFT
KDVETEGVLTVIEEQWQKAINFGLSAQYPDAVPLTILRDDLAARLDQERISQRFLAGPIN
FCTLMPMRSIPFKVVCLLGMNDGVYPRTLPPLGFDLMAHQVKKGDRSRRDDDRYLFLEAM
LSAQQRLYISFIGRSIQDNSERYASVLVTELMEYIGQSFVLPDDLDREADESERRVREHL
VCWHARMPFNAENFVPGHEHQSYAKEWLPAASALGEPHPDFNQPLDPQPLEEITLDNLMR
FYRHPVRAFFQMRLGVNFILEETELPDEEPFVLDSLNRYKFNSQLLNTLIEEQDVSALYD
RVKASGALPYGAFGEIYWQTQSEEMGALAERVRGLRGESHSEEVALQIGGAWVTGWIHQV
QADGLLRWRPAQLNAVDGILLWIEHLAYCASGGEGASRSYGRKESEWHFPPLPADEAAQL
LGQLIEGYRQGMREPLLLLNKSGWAWLNQCYDSQTGEIKRDDETQGKARGKLLQAWLGDP
RMPGESEDPYLQRVIRQLDEDDIIQIQRQAERFLLPLMRHHQPDA
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgttcaccgtctaccactccaaccatctggatttgctaaaaaaattgattgccgcactg
attgaggggcaaccgcttgccgatccctttgagcaggaggtgatcctggtgcaaagcccc
ggcatggcgcagtggctgcaaatgcagctggcggaggagtttggcatcgcggcgaatatc
cacttcccgctgcccgccacctttatctgggagatgttcacccgcgtcctgccgggcatc
ccgaaagagagcgccttcagcaaagatgcgatgacctggaagctgatgtggttgctgccg
cagatgttgccgcagccggagttcacggcgctgcgccactacctgactgatgacggcgac
aaacgcaaaatccaccagcttgcggcgcgggtggcggatctgttcgaccaatatctggtc
taccgaccgacctggctcgaaggatggcagcgcggtgagctgcaaccggatttgggcgag
gcgcagcagtggcaatcggtgctgtggaagcggctgtgtgaatacaccgaatcgctgaac
cagccgacgtggcaccgcgccaacctctaccagcgctttatctccaccctgcaccagagc
gcggagtgcccgccggggttgccgaagcgggtctttatctgcggcatctcggcactgccg
ccggtctacctacaggcgttgcaggcgctcggccagcacatcgacatccacctgatgttc
accaacccctgccgctactactggggcgacatccagaactacgccttcctggcgaagttg
cagagccgcaagcgccgtgactatctggcgcgcgcggaggtcgatctgttccgtgacccg
gagcaggcaccgcaactgttcaatcaggagggcgagcaggcgctgaccaacccgttgctg
gcctcctggggcaagctggggcgcgatcatatgtatttgctgtcgcaggtggatgagatc
caagaggtgcaggcatttgttgagctggaggatgatagcctgctccatgcggtgcagcgc
gacatgctggagctggatgaccgggcggtgctcggcatgacgccggagacgctggccagc
agcgctggcaagcggctgcttgacccgcaggatcgctccatctgcatccacgcctgccac
agcccgcagcgcgaggtggaggtgctgcacgacaaattgctgacgatgatggccgaagac
ccgtcactgacgccgcgcgacatcatcgtgatggtggcggacatcgacagctacgcgccc
tatattcaggcggtgttcggcaacgcgccgccagagcgctacctgccgttcgccatctct
gaccgcaaggccagtcaggcccacccggcgttgcaggccttcctctcgctgctggagatg
ccgcagagccgcttcaccgccgagcaggtgctggcgctgctggaggtgcccgcgctggcc
agccgcttctccatccatgaagatgggttgcggctgctgcgcctgtgggtcagcgagtct
ggcatccgctgggggctggatgatgatgccatccgccagttggcgctgccgccgaccggc
cagcacacctggcgctttggcctgacgcgcatgttgctgggctatgcgatggagagcgag
gcaggccactggcagggcgtgctgccctatgacgaaaccaccgggctggcggcggagctg
gctggccacctggccgaactgttgatgcagttgacgcgctggcgcagcctgctggctgag
tcccgcccactggccgactggctgccgctctgccggcagatgctcgataccttcttcacc
aaggacgtggagacggagggggtactgacggtgattgaggagcagtggcagaaggcgatc
aactttggcctctcggcgcagtacccggacgcggtgccgctgaccatcctgcgggatgac
ctggcggcgcgcctcgatcaggagcgcatcagccagcgctttttggcggggccgatcaac
ttctgtaccctgatgccgatgcgctcgatcccgtttaaagtggtctgcctgctcggcatg
aatgatggcgtctacccgcgcaccctgccaccgctcggctttgacctgatggcgcatcag
gtgaagaagggcgaccgcagccgccgcgacgatgaccgctacctgtttttggaggcgatg
ctctccgcgcagcagcggctctacatcagctttatcggccgctctattcaggacaacagc
gagcgctacgcctcggtgctggtgacggaactgatggagtatatcggccaaagctttgtg
ctgccggatgacctggatcgtgaggcggatgagagcgagcggcgcgtgcgcgagcatctg
gtgtgctggcatgcgcgaatgccattcaatgccgaaaattttgtaccgggccatgagcac
cagagctatgccaaagagtggctgcccgctgccagcgccctcggcgagccacacccggac
ttcaaccagccgctggatccgcagccgctggaggagatcacgctggacaacctgatgcgc
ttctatcgccatccggtacgcgccttcttccagatgcggctgggggtcaacttcatcctt
gaagagaccgagctgccggatgaggagccgttcgtgttggacagcctcaaccgctacaaa
ttcaacagccagttgctgaatacgctgatcgaagagcaggatgtctcggcgctctacgat
cgcgtgaaagcctctggcgcgctgccctacggcgcgtttggcgagatctactggcagacg
caatctgaggagatgggcgcgctggcagagcgggtgcgtggcctgcgtggcgagtcgcac
agcgaggaggtcgccctgcaaatcggtggcgcgtgggtgactggctggatccatcaggtg
caggctgacggcttgctgcgctggcgtccggcgcagctgaacgcggtggatggcatattg
ctgtggattgagcatttggcgtattgtgcatcggggggcgagggggccagccgcagctat
ggccgcaaggagagcgagtggcacttcccgccgctgccggccgacgaggcggcgcagctg
ctggggcaactgattgagggttaccgccaagggatgcgcgagccgctgctattgctgaac
aagagcggctgggcctggctcaaccagtgttatgattcccagaccggtgagatcaagcgc
gacgatgagacgcagggcaaggcgcgcggcaagctgttgcaggcgtggctgggcgacccg
cggatgcccggcgaaagcgaggatccctacctgcaacgtgtcatccgccaactggatgag
gatgacattatccagattcagcgtcaggcagagcgcttcttgctgcccctgatgcgccat
catcaacccgatgcctga
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