Nissabacter sp. SGAir0207: C1N62_03395
Help
Entry
C1N62_03395 CDS
T09781
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
nig
Nissabacter sp. SGAir0207
Pathway
nig03030
DNA replication
nig03430
Mismatch repair
nig03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C1N62_03395
03430 Mismatch repair
C1N62_03395
03440 Homologous recombination
C1N62_03395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nig03032
]
C1N62_03395
03400 DNA repair and recombination proteins [BR:
nig03400
]
C1N62_03395
Enzymes [BR:
nig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C1N62_03395
DNA replication proteins [BR:
nig03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C1N62_03395
DNA repair and recombination proteins [BR:
nig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C1N62_03395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QCR35198
UniProt:
A0A4P8SAV4
LinkDB
All DBs
Position
782843..786325
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKVGPLVKRAAALAMPALAITDFTNLCGLVKFYGSAHGA
GIKPIIGADFHLQSPELGDELAQLTVLAMNNEGYQNLTLLISRAYQRGYGALGPTIERDW
LVEHRGGLLLLSGGRQGDVGKFLLRGNQTLVEQTLAFYAEHFPSRYYLELIRTGRPDEES
YLHAAVTLATTHGVPVVATNDVRFIETDDFDAHEIRVAIHDGFTLDDPKRPRNYSPQQFM
RSEEEMCELFADIPEALANSVEIAKRCNVTIRLGEYFLPQFPTGEMTTEDFLVVKSKEGL
EKRLAFLFPDEEERARRRPEYDERLDIELNVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALEITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDLVIEHVAE
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVRALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDAEGNHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARRAKQGLEPIDIAAIPLEDKKSFDML
QRAETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDIQWQHESLKPVLEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEEM
AKQRSVFKEGAEGMGIDGELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTDKVVGLVDECWRMGLKILPPDINSGQYHFHVNDEGEIVYGIGAIKG
VGEGPIEAIIEARNQDGYFKELFDLCARSDIKKLNRRILEKLIMSGAFDRLGPHRAALMN
SLGDALKAADQHAKAEAIGQVDMFGVLAEAPEQVEQSYASVAPWPEQKVLDGERETLGLY
LTGHPITQYLKEIERYAGGQRLKDMHPTERGKMTTAVGLVVASRVMVTKRGNRIGVCTLD
DRSGRLEVMLFTDALEKYQHLLEKDRILIASGQVSFDDFSGGLKMTARELMDISEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQREDARARLRFGATWRVTPTD
RLLIDLRTLVGNEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacctcgttttgttcacctgcgcgtacacagtgactactccatgattgatggg
ctagccaaagtgggcccgttggttaagcgagcggctgccctggcaatgccagctctggca
atcaccgatttcaccaacctgtgtgggttggtgaagttctacggcagcgcgcatggcgcc
ggtatcaagccgattatcggggccgacttccatctgcaaagcccggagttgggcgacgaa
ctggcccagctgacggtgttggcgatgaataatgagggttatcagaacctgacgttgctc
atctcccgtgcctatcagcgtggttatggtgccttggggccaaccattgagcgtgactgg
ctggtggagcaccgcggcgggctgctgttgctctcgggcggacggcagggcgacgtaggt
aaattcctgctgcgcggcaaccagacgctggtagagcagacgctcgccttctatgccgag
cacttccccagccgctactatctggagctgatccgcaccggccgcccggatgaagagagt
tacctgcatgcggcggtgacgctggcgaccacccacggcgtgccggtggtggcgaccaac
gacgtccgcttcattgagacggatgactttgacgcccatgagatccgtgtcgccatccat
gatggcttcaccctcgacgatcccaagcgcccacgcaactacagcccgcagcaatttatg
cgcagcgaagaggagatgtgcgagctgtttgccgacatccctgaggcgctggccaacagc
gttgagatcgccaagcgctgtaacgtcaccatccggctgggcgagtacttcctgccgcaa
ttcccgaccggcgagatgaccaccgaagacttcctggtggtgaaatcgaaagaggggctg
gagaagcgactggccttcctgttcccggacgaggaggagcgggcgcggcggcggccagag
tatgacgagcggctcgacattgagctgaacgtaatcaaccagatgggcttccccggctac
ttcctgatcgtgatggagtttatccagtggtcgaaggataacggcgtaccggttgggccg
gggcgtggttcgggcgccggctcgctggtggcctacgcgctggagatcacggatctcgat
ccgctggagtttgacctgctgttcgagcgcttccttaacccggagcgtgtctcgatgccc
gactttgacgtcgacttctgcatggagaagcgcgatctggtgattgagcacgtcgcggag
atgtatggccgtgacgcggtttcccagatcatcaccttcggcaccatggcggcgaaggcg
gttatccgcgacgtgggccgcgtgctgggccacccctatggtttcgtcgatcgtatctcc
aagctggtgccgcccgatccgggcatgacgctggcgaaagcctttgaggcggaaccgcaa
ctgccggagatctacgaggcggatgaagaggtgcgcgcactgattgacatggcgcgcaag
ctggagggggtgacccgcaacgccggcaaacacgccggtggcgtggtgattgcgcccacc
aagatcaccgatttcgcgccgctctactgcgacgccgagggcaaccatccggttacccag
ttcgacaagaacgacgtggagtacgccggtctggtgaagttcgacttcctcggcctgcgc
accctgaccatcattaactgggcgctggagatgatcaacgcccggcgtgccaagcagggg
ctggagccgattgatatcgccgccatcccgcttgaggacaaaaagagcttcgacatgctg
caacgggcggagaccaccgcggtcttccagcttgaatcgcgcggcatgaaggatctgatc
aaacgcctgaagccagactgcttcgaagatatgatcgcactggtggcgctgttccgcccc
ggcccgctgcaatcgggcatggtggataacttcatcgaccgtaagcacgggcgcgaggag
atctcctacccggatatccagtggcagcatgagtcactgaagccggtgctggagccgacc
tacggcatcatcctctaccaagagcaggtgatgcagattgcccaggtgctggcgggctac
accctgggcggcgccgacatgctgcgccgtgcgatgggcaagaaaaagccagaagagatg
gcgaagcagcgctcggtcttcaaagagggtgccgaagggatgggcatcgacggcgaactg
tcgatgaagatcttcgatctggtagagaagttcgcgggttacggcttcaacaaatcccac
tccgctgcctatgcgctggtctcctaccagacgctgtggctgaaggcgcactatcccgcc
gaatttatggcggcggtaatgactgccgacatggacaacaccgacaaggtggtcgggctg
gtggatgagtgctggcggatggggctgaagatcctgccgccggacatcaacagcgggcag
taccacttccacgtcaatgacgagggcgagatcgtctacggcatcggcgccatcaagggc
gtgggcgaggggccgattgaggcgatcattgaggcgcgcaatcaggatggctacttcaag
gagctgttcgacctctgcgcccgctcggacatcaagaagctgaaccgccgcatcttggag
aagctgatcatgtccggggcgtttgaccggctggggccgcaccgcgcggcgctgatgaac
tcgctcggcgatgcgctaaaggcggcggatcagcacgccaaggcggaggccatcggccag
gtggacatgtttggcgtgctggccgaggcaccggagcaggtggagcagtcctacgctagc
gtcgcgccgtggccagagcagaaagtgctggatggcgagcgggagacgctggggctgtac
ctcacaggccacccgattacccaatatctcaaggagatcgaacgctatgccggcgggcag
cgtttgaaggatatgcatccgacggaacggggcaaaatgaccactgccgttggcctggta
gtggcatcacgcgtgatggtcaccaaacggggtaaccgcatcggcgtctgcacactcgat
gaccgctcaggccgtctggaggtgatgctgttcactgatgcattggaaaaataccagcat
ttgctggaaaaagaccgtatcctgattgccagcggacaggtcagctttgatgacttcagc
ggcggccttaaaatgaccgcccgcgaactcatggacatcagtgaagcccgggaaaaatat
gctcgcgggcttgctatctcgctgactgacaggcaaattgatgaccagcttttgaaccgt
ctccgacagtcgttggaaccccatcgatcggggacgattccagtgcatctgtattatcag
cgcgaagatgcacgcgcccgcctgcggtttggggcaacgtggcgcgtaacgccgaccgac
cgcctcttgattgatttgcggacgttggtcggcaatgagcaggtggaactggaatttgac
taa
DBGET
integrated database retrieval system
