Nissabacter sp. SGAir0207: C1N62_05300
Help
Entry
C1N62_05300 CDS
T09781
Name
(GenBank) ATP-dependent helicase
KO
K19789
DNA repair protein RadD
Organism
nig
Nissabacter sp. SGAir0207
Brite
KEGG Orthology (KO) [BR:
nig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nig03400
]
C1N62_05300
DNA repair and recombination proteins [BR:
nig03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
C1N62_05300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
DUF7577
Zn_Ribbon_1
AAA_30
zf-tcix
AAA_22
SLFN-g3_helicase
DZR
AAA_16
TniB
Zn_ribbon_3
AAA
Motif
Other DBs
NCBI-ProteinID:
QCR35544
UniProt:
A0A4P8SMU4
LinkDB
All DBs
Position
complement(1257178..1258938)
Genome browser
AA seq
586 aa
AA seq
DB search
MSFTLRPYQREAVEATLSYFRRRQDPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKE
LVAQNHAKYRAYGLEADIFAAGLQQKASAGKVVFGSVQSVARNLDQFDGAFSLLIVDECH
RISDEDESQYQQVLNHLRRANPQLRLLGLTATPYRLGKGWIYQFHYHGMVRGDEKSLFRD
CIYELPLRYMIKHGFLVPPERLDMPVVQYDFSRLQANSNGLFNESELNRELKQQQRITPH
IISQIMEYAADRRGVMIFAATVEHAGEIHGLLPAGEAALVSAQTPPAERDRLIEAFKQQQ
LRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSPGKQDCLILDYAGNP
HDLFTPEVGAAKGASDNQPVQVFCPACGFANLFWGKALPDGTVIEHFGRRCQGWFEDDEG
HREQCDFRFRAKSCPHCGAENDIAARRCHQCNQVLVDPDDMLKAALKLKDALVLRCGGMA
LESGRDDKGEWLNVTYYDEDGASASERFRLSSPAQKLAFQQLFVRPHQRAPGVPFSWQSA
ADVLAQQALFRHPDFVVARLKGRFWQIREKVFDYQGRFRRANELRG
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttacccttcgcccctaccagcgcgaggccgtcgaggccacgctgagctacttc
cgccgtcgccaggatccggcggtgatcgtgctgcccaccggggctggcaagagtctggtg
atcgctgaactggcgcggctggcgcgcggccgggtgctggtgctggcgcacgtcaaggag
ctggtggcgcagaaccatgccaagtatcgcgcctatgggctggaggcggacatcttcgcc
gccgggctgcaacagaaggcgagcgctggcaaagtggtgttcggcagcgtgcagtcggtg
gcgcgcaacctcgaccagttcgatggtgccttctcattgctgattgtcgatgagtgccac
cgcatcagcgacgaggatgagagccagtaccagcaggtgcttaaccacctgcggcgcgcc
aacccccagctgcggctgctggggctgaccgccaccccctaccgcctcggcaaggggtgg
atctaccagttccactaccacggcatggtgcgcggcgatgaaaagagcctgttccgcgac
tgcatctatgagctgccgctgcgctacatgatcaagcatggctttctggtgccgccggag
cggctcgacatgccggtggtgcagtatgatttcagccgcttgcaggccaacagcaacggg
ctgttcaacgaatctgaattgaaccgcgagctgaagcagcaacagcgcatcaccccgcac
atcatcagccagatcatggagtatgccgccgaccggcgtggggtgatgatcttcgctgcc
accgtcgagcacgctggcgagatccacggcctgctaccggctggcgaggcggcactggtg
agcgcccagacgccgcccgccgagcgtgatcggctgattgaggccttcaagcagcagcaa
ctgcgctatctggtcaacgtggcggtactgaccaccggctttgacgcgccacacgttgac
ctgattgccattctgcgcccgaccgagtcggtcagcctctaccagcagatcgtgggccgc
ggcctgcgcctcagccccggcaagcaggattgcctgatcctcgactacgctggcaacccg
cacgacctgttcacgccggaggtgggtgccgccaagggggcctctgacaaccagccggtg
caggtgttctgcccggcctgcggtttcgccaacctgttctggggcaaggcgctgccggac
ggcacggtgattgagcactttggccgccgctgccagggctggttcgaggacgatgagggc
caccgcgagcagtgcgacttccgcttccgcgccaaaagctgcccgcactgcggcgcggag
aatgacatcgccgcgcgccgctgccaccagtgcaatcaggtgctggtcgatcccgatgac
atgctgaaggcggcgctgaagctgaaagatgcgctggtgctgcgctgcggtggcatggcg
ctggagagcgggcgcgatgacaaaggcgaatggctgaacgtcacctactacgacgaggat
ggcgccagcgccagcgagcgcttccgcctgagcagcccggcgcagaaactggcgttccag
cagctgttcgtgcggccgcaccagcgcgcgccgggcgtgccctttagctggcagagcgcc
gccgacgtgctggcgcagcaggcgctgttccgccaccccgattttgtggtggcgcgcctg
aaggggcgcttctggcagatccgcgaaaaggtgttcgactatcaggggcgcttccgccgc
gccaatgaactgcgcggctaa
DBGET
integrated database retrieval system