Nissabacter sp. SGAir0207: C1N62_11635
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Entry
C1N62_11635 CDS
T09781
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
nig
Nissabacter sp. SGAir0207
Pathway
nig03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C1N62_11635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nig03400
]
C1N62_11635
DNA repair and recombination proteins [BR:
nig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C1N62_11635
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C1N62_11635
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UvrD-helicase
DUF87
UB2H
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QCR36699
LinkDB
All DBs
Position
complement(2654352..2656358)
Genome browser
AA seq
668 aa
AA seq
DB search
MSKTFKLRSDFKPSGDQPEAIRRLEEGLENGLAHQTLLGVTGSGKTFTVANVIADLNRPT
MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDAAVNEHIE
QMRLSATKALLERRDVIVVASVSAIYGLGDPNTYLKMMLHLTRGMLIDQRAILRRLAELQ
YARNDQAFQRGTFRVRGEVIDIFPAESDDLALRVELFDEEVERLSLFDPLTGHLEQDVQR
FTIYPKTHYVTPRERILEAMEGIKEELADRRKGLLANNKLLEEQRLTQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEAPPTLFDYLPADGLLVIDESHVTIPQLGGMYRGDRARKET
LVEYGFRLPSALDNRPMRFEEFEALAPQTIYVSATPGNYELEKSGGEVIDQVVRPTGLLD
PLIEVRPVATQVDDLLSEIRKRVAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNLNGKAILYGDKITNSMARAIEETERRRAKQMAYNEEHGITPQGLNKRIADILQIG
QPTSRTKQSKRAAEAKATYNALSPKALENKIRELEAKMYVHAQNLEFEEAANVRDEIQQL
REQFIAAS
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaacgttcaaacttcgttccgatttcaagccgtccggggatcagcccgaggcg
atccgccgcctggaagaggggctggagaacggactggcgcaccagacactgctcggggtg
accggttccggcaagacctttaccgtcgccaacgtcatcgccgacctcaatcgccccact
atggtgctggcacccaacaagacgctggcggcgcagctctatggcgagatgaaggagttc
ttcccggagaatgccgtggagtacttcgtctcctactacgactactaccagccggaagcc
tacgtgcccagctccgacacattcatcgagaaggacgcggcggtcaacgagcatatcgag
cagatgcgcctgtcggccaccaaggcgctgctggagcggcgcgacgtgatcgtggtggcc
tcggtctccgccatctacggcctcggcgatcccaatacctacctgaagatgatgctgcac
ctgacgcgcggcatgttgatcgaccagcgcgccatcctgcgtcggctggcggagctgcaa
tatgcccgcaacgatcaggcgttccagcgcggcaccttccgcgtgcgcggcgaggtgatt
gacatcttcccggcggagtccgatgacctggcgctgcgtgtggagctgttcgacgaggag
gtggagcgcctgtcgctgttcgacccgctcaccggccacctggagcaggatgtacagcgc
ttcaccatctaccccaagacccactacgtgacgccgcgtgagcgcatcctggaggcgatg
gagggcatcaaggaggagctggctgaccgccgcaaggggctgctggcgaacaacaagctg
ctcgaagagcagcgcctgacccagcgcacccagtttgacctggagatgatgaacgagctg
ggttactgctccggcattgagaactactcgcgctacctctccggccgcgggccgggcgag
gccccgccgacgctgtttgactacctgccggccgacggcctgctggtgatcgatgagtcg
cacgttaccattccgcagcttggcggcatgtaccgcggcgaccgcgcgcgcaaagagacg
ctggtggagtatggcttccgcctgccgtcggcgctcgacaaccgcccgatgcgctttgag
gagtttgaggcgctggcaccgcagaccatctacgtctcggcgacccccggcaactacgag
ctggagaagtcaggcggcgaggtgattgaccaggtggtgcggccgaccggcctgctcgac
ccgctgattgaggtgcgcccggtggccacccaggtagatgacctgctctctgagatccgc
aaacgcgtggcgatcaatgagcgtgtgctggtcaccacactgaccaagcgcatggcggag
gatttgaccgagtacctggaggagcatggcgagcgggtgcgctacctgcactctgacatt
gacaccgtggagcgtgtcgagatcatccgcgacctgcgtctgggcgagtttgacgtgctg
gtgggcatcaacttgctgcgtgaggggttggacatgccagaggtgtcgctggtggcgatc
ctcgacgccgacaaagagggcttcctgcgctccgagcgttcgctgatccagaccatcggc
cgcgcggcgcgtaacctgaacggcaaggcgattctctacggcgacaagatcactaactcg
atggcgcgcgccattgaggagacggagcgccgccgcgccaagcagatggcttacaacgag
gagcatggcatcacgccgcagggcctcaacaagcgcatcgccgacatcctgcagatcggc
cagccgacctcgcgcaccaagcagagcaagcgtgccgccgaggcgaaggccacctacaac
gcgctgtcgccaaaggcgctggagaacaagatccgcgagctggaggccaaaatgtacgtc
cacgcccagaacctggagttcgaggaggcggccaacgtgcgcgacgagatccagcaactg
cgcgagcagttcatcgccgcctcctga
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