Nissabacter sp. SGAir0207: C1N62_13000
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Entry
C1N62_13000 CDS
T09781
Name
(GenBank) ATP-dependent dsDNA exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
nig
Nissabacter sp. SGAir0207
Brite
KEGG Orthology (KO) [BR:
nig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nig03400
]
C1N62_13000
DNA repair and recombination proteins [BR:
nig03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C1N62_13000
Archaeal homologous recombinant proteins
C1N62_13000
BRITE hierarchy
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
COG6_N
AAA_21
cobW
ABC_tran
AAA_15
nSTAND3
RsgA_GTPase
AAA_22
NTPase_1
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
QCR36939
UniProt:
A0A4P8SK79
LinkDB
All DBs
Position
2937982..2941653
Genome browser
AA seq
1223 aa
AA seq
DB search
MKILSLRLKNLNSLQGEWKIDFTQEPFLSNGLFAITGPTGAGKTTLLDAICLALYHQTPR
LNVTPSHNELMTRHTAESLAEVEFEVKGVAYRAFWSQRRAKNAPDGNLQAPKVELARCAD
GKILADKVRDKLESVAQITGLDFGRFTKSMMLSQGQFAAFLNADANDRAELLEELTGTEI
YGQLSERVFEQHKQARLDLEALHHRAAGIELLTEAQRQALEAQLDALAQQETQQTAQAAE
QQRGIAWIQQDHAHQQALAQAEQRVQAADAAWQQAQPDLTRLAHNEPAEKLRPLQRERDQ
ALTAQRAHQQQLGDLLNRQQQQQQALTPLAAAVEQARQQREARLQQQQQQEALIAQVMPL
DAQLTQLTQQCTEARQAEAAQQQQLAACRQQCQTIEQQLHAERAQQAELAQWQHDHAHHA
QWGDLLPQWRAQLAQQLALRQRVQHAQQQSKASQQQLTHLQQAQQTLAHQRPALLQAREQ
AEAQLRGQQQQLAVLAQQQPEEALRQRLDALHAQRPHRRQLTSLAPLVQQGLRQQAELAR
QQQALHQRLLQAEQQLEEKRRHFKQQKQHLEDLRALHEREKQIVSLEAERARLQAGEACP
LCGATEHPAIAHYQAIQPSATAQRLAALEQQVDETRTSGTELGAQAKSLKEQEAQLVQAL
ASLTEQQAQWQQQWQALAKSLALPFTLAQADEATLWLEAREQEETQAQQQWQAREHQLQA
VRQAQDALTQAQQAEQQWQHQHDLLAERQQEQQKQHDAQQQTLTQEQQALEQAQALFSTG
LADAGLPPSQPDEPWLEARQQEWRQWQQQQQAQQALAVSLKEREIRREAEQRTLAESQNA
LAQHQTRCTALEAQQLAVRKQRTALFGERQISEARDALHRQLTEAEHASRQAEAAQQQAH
QQLSRLEGELATLRQQQQRLDEQAQQADAHWAAALAASPFADEAALNAALLDEPTRDALT
AQREALIQQRQESETLRKQAAEALAHSATQRPATLAPDAEASALESELASLRQQLRQSAQ
QQGELRQQLESDRQRRGSQQQLFAQIEESQQQFRDWSALNALIGSSDGAKFRRFAQSLTL
DHLVYLANRQLERLHGRYLLQRKESDALELQVVDTWQADALRDTRTLSGGESFLVSLALA
LALSDLVSHKTSIDSLFLDEGFGTLDAETLDTALDALDNLNASGKTIGVISHVDAMKERI
PVQIRVKKVNGLGVSRLGKEFAV
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctgagcctgcggctgaaaaacctcaactccctgcaaggcgagtggaagatc
gactttacccaggagcccttcctcagcaacggcctgtttgccatcaccgggccgaccggc
gcgggcaaaaccacgctgctggatgccatctgtctggcgctctaccaccagacgccgcgg
ctgaatgtcactcccagccataacgagctgatgacccgccacaccgccgagtcgctggcg
gaggtggagtttgaggtgaagggcgtggcgtaccgcgccttctggagccagcgacgcgcc
aaaaacgcgccggatggcaatttgcaggcgccgaaggtggagctggcgcgctgcgccgat
ggcaagatcctggccgacaaagtgcgggacaaactggagtcggtggcgcagatcaccggg
ctggactttggccgcttcaccaagtcgatgatgttgtcgcaggggcagttcgccgccttc
ctgaacgcggacgccaatgaccgcgccgagctgctggaggagctgaccggcaccgagatc
tacggccagctctccgagcgggtgtttgagcagcacaagcaggcgcggctggatctggag
gcgctgcaccaccgtgccgctggcattgaattgctgaccgaggcgcagcggcaggcgctg
gaggcgcagcttgatgcactggcgcagcaagagacacagcaaaccgcacaggcggcagag
cagcagcgcgggatcgcctggatccagcaggatcatgcccaccagcaggcgctggcgcag
gccgagcagcgtgtgcaggccgcggatgccgcatggcagcaggcgcagccagatctcacc
cggttggcacacaatgaacctgccgagaagctgcggccgctgcaacgggagcgcgatcag
gcgctcaccgcccagcgtgcgcatcagcagcagcttggcgacctgctcaatcggcaacag
cagcagcaacaggcgctgacaccgctggccgccgccgtggaacaggcgcggcagcagcga
gaggcacggttgcagcaacagcagcagcaggaagcgctgatcgcgcaagtgatgccgctg
gatgcgcaacttacgcaactgacccaacagtgcacggaggcgcggcaagcggaagcggca
cagcagcagcaactggcggcatgtcgccagcagtgccaaaccattgagcagcaactccac
gctgaacgcgcccagcaggccgaactggcgcagtggcagcacgatcacgcccaccatgcc
cagtggggcgacctgttgccgcagtggcgtgcgcaactggcgcagcagctggcgttgcgc
cagcgtgtccagcacgcgcagcagcagagtaaggcgtcccagcagcagcttacccacctg
caacaggcgcagcagacgctggcgcaccagcggccagccctgctacaggcgcgggagcag
gccgaggcgcagttgcgcggccagcagcagcaactggccgttttggcgcaacagcagccg
gaggaggcgctgcgccagcggctggacgcgctgcacgcccagcgcccgcaccggcgtcag
ttgaccagtttggctccgctggtgcagcagggcctgcggcaacaggcggagctggcgcgg
cagcaacaggcgctccaccagcgcctgttgcaagccgagcagcagctggaggagaagcgc
cgccacttcaaacagcagaaacagcaccttgaagatttgcgggcgctgcatgagcgcgag
aaacagattgtcagtctggaggcggagcgcgcccggcttcaggccggtgaagcctgccca
ctgtgcggggccaccgagcacccggcaattgcccactatcaggcgatccagccctccgcc
accgcccagcggcttgcggcgctggagcagcaggtagacgagacgcgcaccagcggcacc
gaactgggcgcgcaggccaagagcctgaaggagcaggaggcgcaactggtgcaggcgctg
gcgagtctcacggagcagcaggcgcagtggcaacagcagtggcaggcgttggcaaagtcc
ctcgccctgcccttcacgctggcgcaggccgacgaagccaccctctggctggaggcgcgc
gagcaggaggagacgcaggcgcagcagcagtggcaggcgcgggagcaccagttacaggcg
gtgcggcaggcgcaggatgcgctgacccaagcccagcaagcggaacagcagtggcagcac
cagcatgatttgctggccgagcggcaacaggagcaacagaagcagcatgacgcccagcaa
cagacgctgacgcaggagcaacaggcgctggagcaggcacaggccctcttcagcaccggg
ctggctgacgctggcctgccgccgtcacagccagatgagccgtggcttgaggcgcgccag
caggagtggcggcagtggcaacagcagcaacaggcccagcaggcactggcggtttcgttg
aaagagcgcgagatccgccgcgaggctgaacagcgcaccctggccgagagccaaaatgcg
ctggcgcagcaccagacgcgctgtacggcactggaggcacaacagctggcggttcgcaag
cagcgcacggctctgtttggcgaacggcaaatcagtgaggcgcgcgatgccctgcaccgt
caactgacggaggcggagcacgccagccgtcaggcggaagcggcgcagcagcaggcgcat
cagcagctaagccggctggagggcgaactggcgacgctacgccagcagcagcagcggctg
gatgagcaggcgcaacaggccgacgcccattgggccgccgcgctggccgccagcccattt
gcggatgaggcggcgctcaacgccgccctgttggacgaaccgacccgtgacgcgctgacc
gcgcagcgtgaggcgctgatccagcagcgtcaggagagcgagacgctgcgcaaacaggcc
gccgaggcgctggcgcacagcgcaacgcagcggcccgccacgctggcaccggacgccgag
gccagtgccttggagagcgaacttgccagcctgcgccagcagttgcgccagtcggcgcag
caacagggggagttgcgccagcagttggagagcgatcgccagcggcgcggcagccagcag
caactgtttgcgcaaatcgaggagagccagcagcagttccgcgactggagcgccctgaac
gcgctgattggctcgagcgacggcgccaagttccgccgtttcgcccagagcctgacgctg
gatcatctggtctatctggcgaaccggcaactggagcggctgcatggccgctacttgctg
caacgcaaagagagcgacgcgctggagttgcaggtggtggacacctggcaggctgacgcg
ctgcgtgatacccgcaccctctccggcggcgaaagtttcttggtgagtctggcgctggcg
ctggcactctccgatctggtcagccacaaaaccagcatcgactcgctgttcctggatgag
ggcttcggcacgctcgatgccgaaaccctggacaccgcgctggatgcgctcgacaacctc
aacgcctccggcaaaaccattggcgttatcagccacgtggacgcgatgaaagagcgcatc
ccagtgcagatccgggtgaagaaggtcaacggcctcggcgtcagtcggctcggcaaggag
tttgctgtctga
DBGET
integrated database retrieval system