Nissabacter sp. SGAir0207: C1N62_14360
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Entry
C1N62_14360 CDS
T09781
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
nig
Nissabacter sp. SGAir0207
Brite
KEGG Orthology (KO) [BR:
nig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nig03021
]
C1N62_14360
Transcription machinery [BR:
nig03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
C1N62_14360
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_34
Cas3-like_C_2
Flavi_DEAD
COG2_N
Motif
Other DBs
NCBI-ProteinID:
QCR37178
LinkDB
All DBs
Position
3228922..3231828
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AA seq
968 aa
AA seq
DB search
MPFKLGQRWISDTESELGLGTVVALDARMVTLLFPATGENRLYARNDSPITRVMFNPGDT
VTSHEGWQLHVDEVKEDNGLLTYIGVRQDTGESPVAMREVLLDSKLTFSKPQDRLFAGQI
DRMDRFALRFRARKYLREQYRLQWSGLRGMRASLIPHQLHIAHEVGRRHAPRVLLADEVG
LGKTIEAGMIIHQQLLAGRADRVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYAESLH
EATNPFESEQLVICSLDFVRRNKGRLEQLADAAWDLLVVDEAHHLAWSEEAPSREYQVIE
QLAEQTPGVLLLTATPEQLGPQSHFARLRLLDPNRFHDYHDFVAEQQQYRPVADAVTLLM
SGNALSNDEQNLLGEMVSEQDIEPLLAAANGEGEQSEAARRELVSLLMDRHGTSRVLFRN
TRNGVKGFPHRVLHEIRLPLPSQYQTAIKVSGIMGAKKSTEERARDMLYPERIYQEFEGE
NGTWWNFDPRVEWLMGFLTANRHEKVLVICAKAETALQLEQVLREREGIRAGVFHEGLSI
IERDRAAAYFASEEEGAQVLLCSEIGSEGRNFQFASHLVMFDLPFNPDLLEQRIGRLDRI
GQLHDIQIMVPYLEQTAQAVLIRWYHDGLDAFEHTCPTGRTIYDKHHEQLVTYLAAPTQT
DGLPEFIHQCRLEHDALKQQLEQGRDRLLEMHSNGGEAAQALAESIAECDNDVNLVNFAL
NLFDIVGINQDDRSDNLIVLTPSDHMLVPDFPGLPQDGCTVTFDREQALSREDTQFITWE
HPIIRNGLDLILSGDTGSCAVSLLKNKALPVGTLLAELVYVVEAQAPKHLQLTRFLPPTP
IRMLMDRKGTNLAKQVEFESFNRQLNAVNRHTSSKLVNAVQQDVHAMLQQAEALVADEAK
ALIEAAKVEADEQTSSELARLEALRAVNPNIRDDEVEALEHNRTQVLANLNDATWRLDAI
RLVVVSHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccctttaaacttggtcagcgctggatcagcgatacggaaagcgaattaggattaggc
actgtggtggcgctcgacgcgcgcatggtgacgttgctcttccccgcgaccggcgaaaac
cgcctttatgccagaaacgactcccctatcacccgcgtgatgttcaatccgggcgatacc
gtcaccagccatgagggctggcaactgcacgtggatgaagtgaaagaggataacggcctg
ctgacctatatcggcgtgcgccaggataccggcgagtcgccggtggcaatgcgcgaggtg
ctgctcgacagcaagctgaccttcagcaagccgcaggatcgcctgtttgccggccagatt
gaccgcatggaccgttttgcgctgcgcttccgcgcccgcaaatacctgcgtgagcagtac
cgcctgcaatggagcggcctgcgtgggatgcgcgccagcctgatcccgcaccagctgcac
atcgcccatgaagtgggccgccgccatgcgccgcgcgtgctgctggcggacgaggtgggt
ctgggcaagaccatcgaagccgggatgatcatccaccagcaactgctcgctggccgggcc
gatcgcgtgctgatcgtggtgccggagacgctccagcaccagtggctggtggagatgctg
cgccgcttcaacctgcgtttctccctgtttgatgatgagcggtatgccgagtcgctgcac
gaggcgaccaacccgttcgagagcgagcagctcgttatctgttcgctggacttcgtgcgc
cgcaacaagggccgtctggagcagctggcggacgccgcctgggatctgctggtggtggat
gaggcgcaccacctggcctggagcgaagaggcaccaagccgcgagtaccaagtgattgag
caactggccgagcagacgccgggcgtgctgctgctgaccgccacccccgagcagctgggg
ccgcagagccacttcgcgcgcctgcgcctgctcgacccgaaccgtttccacgactaccac
gattttgtcgccgagcagcagcagtaccgcccggtcgccgacgccgtgaccctgctgatg
agcggcaacgccctctccaacgacgagcagaatttgctgggcgagatggtctccgagcag
gacattgagccgctgttggcggcggccaacggcgagggcgagcagagcgaggcggcacgc
cgcgagctggtctccctgctgatggatcgccacggcaccagccgcgtgctgttccgtaac
acccgtaacggcgtgaagggcttcccgcaccgcgtgctgcatgagatccgcctgccgctg
ccgtcgcagtaccagaccgcgatcaaggtctccggcatcatgggcgcgaaaaagagcacc
gaggagcgcgcgcgtgacatgctctacccggagcgcatctatcaggagttcgagggtgag
aatggcacctggtggaactttgacccgcgcgtcgagtggctgatgggcttcctgaccgcc
aaccgccacgagaaggtgctggtgatctgcgccaaggccgaaaccgcgctgcaactggag
caggtactgcgtgagcgcgaaggcatccgcgctggcgtcttccacgaggggctgtcgatc
attgagcgcgaccgcgccgccgcctacttcgcctccgaagaggagggcgcgcaggtgctg
ctctgctccgagatcggttccgaggggcgtaacttccagttcgccagccatctggtgatg
tttgacctgccgttcaacccggatctgctggagcagcgcatcggccgccttgaccgtatc
ggccagctgcacgacatccagatcatggtgccttaccttgagcagaccgcgcaggcagtg
ctgatccgttggtatcacgacgggctggacgccttcgagcacacctgcccgactggccgc
accatctatgacaagcaccacgagcagctggtgacctatctggccgcgccgacccagacc
gacggcctgccggagttcatccaccagtgccgtctggagcatgacgcgctgaagcagcag
cttgagcaggggcgcgaccgcctgctggagatgcactccaacggcggcgaggcggcgcag
gcgctggccgagtcgattgccgagtgtgacaatgacgtcaatctggtcaactttgcgctg
aacctgttcgacattgtcggcatcaaccaggatgaccgcagcgacaacctgatcgtactg
acgccctctgaccacatgctggtgccggacttccccggcctgccgcaggatggctgcacc
gtcaccttcgaccgtgagcaggcgctctcgcgcgaggacacccagttcatcacctgggag
cacccgatcatccgcaacggcctggatctgatcctctccggcgacaccggcagctgtgcc
gtctcgttgctgaagaacaaggcactgccggtcggcaccctgctggcggagctggtctat
gtggtcgaggcgcaggcgccgaagcacctgcaactgacccgcttcctgccgccgacgccg
atccgcatgttgatggatcgcaagggcaccaacctggcgaagcaggtggagttcgagagc
ttcaaccgccagctcaacgccgtgaaccgccacacctccagcaagctggtgaacgcggtg
cagcaggatgtccacgccatgctgcaacaggcagaggcgctggtggccgacgaggcgaag
gcgctgattgaggccgccaaggtcgaggccgacgagcagaccagcagcgagctggcccgt
ctggaggcgctgcgtgccgtcaacccgaacatccgtgacgatgaggtggaggcgctggag
cacaaccgcacccaggtgctggcgaacctgaatgacgccacctggcgtctggacgccatc
cgtctggtggtggtgagccaccagtaa
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