Nissabacter sp. SGAir0207: C1N62_16325
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Entry
C1N62_16325 CDS
T09781
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
nig
Nissabacter sp. SGAir0207
Brite
KEGG Orthology (KO) [BR:
nig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nig03021
]
C1N62_16325 (rpoH)
Transcription machinery [BR:
nig03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C1N62_16325 (rpoH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
HTH_10
UCR_14kD
HTH_3
Motif
Other DBs
NCBI-ProteinID:
QCR37522
UniProt:
A0A4P8SGG6
LinkDB
All DBs
Position
complement(3660895..3661752)
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AA seq
285 aa
AA seq
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MTKEMQTLALIPQGSLEAYVRAANAFPMLTAEEERELAERLHYQGDLEAAKQLILSHLRF
VAHIARNYSGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVELVARELGVSSKDVLEMESRMAAQDM
TFDPTPDDEARDGQPMAPMLYLQDKSSDFAEGIEEDNWESNAADKLSYALEGLDERSQDI
IRARWLDDDNKSTLQELADKYGVSAERVRQLEKNAMKKLKMAIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagagatgcaaactttagccttaattccccaaggtagcctggaagcctatgtg
cgggccgccaatgccttcccgatgctgacggcagaggaagagcgggagctggctgaacgg
ctgcattatcagggcgacttggaagcggcgaagcagcttatcctgtctcacctgcgcttt
gtcgctcacattgctcgtaactattcagggtacggtttgccgcaggctgaccttatccag
gaaggcaacatcggcctgatgaaggcagtgcgccgtttcaacccagaggtgggcgtgcga
ctggtgtcgttcgcggttcactggatcaaggcggagatccacgagtacgtgctgcgcaac
tggcgcattgtaaaagtggcgaccaccaaggcgcagcgcaagctgttcttcaacctgcgc
aaaaccaagcagcgtctgggctggttcaaccaggatgaagtggagctggtggcgcgcgaa
ctgggtgtctccagcaaagatgtgctggagatggagtcccgcatggcggcgcaggacatg
acctttgacccgacgccggatgacgaagcgcgcgacggccagccgatggcaccgatgctc
tacctgcaagacaaaagctctgactttgccgagggcatcgaagaggataactgggagagc
aacgcggccgacaaactcagctacgcgctggaggggttggatgagcgttcccaggacatt
atccgcgcccgctggctggacgacgacaacaagtccacgttgcaggagctggccgacaag
tacggcgtctccgccgagcgtgtgcgccagctggagaagaacgccatgaagaaactgaag
atggcgatcgaggcctga
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