Nissabacter sp. SGAir0207: C1N62_16465
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Entry
C1N62_16465 CDS
T09781
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nig
Nissabacter sp. SGAir0207
Pathway
nig03420
Nucleotide excision repair
nig03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C1N62_16465
03430 Mismatch repair
C1N62_16465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nig03400
]
C1N62_16465
Enzymes [BR:
nig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C1N62_16465
DNA repair and recombination proteins [BR:
nig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C1N62_16465
MMR (mismatch excision repair)
Other MMR factors
C1N62_16465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QCR37548
UniProt:
A0A4P8SGT4
LinkDB
All DBs
Position
complement(3687733..3689895)
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AA seq
720 aa
AA seq
DB search
MDVSDLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLLSVENCSPYSIMAV
TFTNKAAAEMRHRIEHLIGTSQGGMWIGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL
RLLKRLIKAMNLDDKQWPARQAMWYINGKKDDGLRPQHIESYGNPVEQTWLRVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILNHYRDRFTNILVDEFQDTNRIQYAWIRLLAGDQ
ANVMIVGDDDQSIYGWRGAQVENIQRFLQDFPKAETIRLEQNYRSTSNILSAANALIANN
NGRMGKNLWTEDAEGERISLYCAFNELDESRFVVNRIKTWQENGGALNDCAILYRSNAQS
RVLEEALLQVSMPYRIYGGMRFFERQEIKDSLAYLRLIANRNDDAAFERVVNTPTRGIGD
RTIDVVRQTARERQLTLWQSCRLLLQEKALAGRAASSLQRFLELVDALAHETSEMPLHVQ
ADRVIKDSGLWMMYEQEKGEKGQARIENLEELVNATRQYSYQDEDEDLMPLQAFLSHAAL
EAGEGQADAYQDAVQLMTLHSAKGLEFRQVFIVGMEEGMFPSQMALDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVFHRPSRFIAELPENCVEEVRLRASVSRPVNTRRMG
APVAQSDSGYSLGQRVRHPKFGEGTIINLEGSGDHSRLQIAFNGEGVKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttctgacctgctcgacagcctcaatgataaacaacgcgaagccgtggcggcg
ccacgcagcaacctgttggtgctggccggcgcgggcagcggcaaaacgcgggtgctggtg
caccggatcgcctggttgctctccgtggagaactgctcgccttactcgattatggcggtg
accttcaccaacaaggcggcggcggagatgcgccaccgcatcgaacacctgatcggcacc
agccagggcgggatgtggatcggcaccttccacgggctggcccaccgcctgctgcgcgcc
caccacatggacgccaacctgccgcaggatttccagatcctcgacagcgaagaccagttg
cgcctgctgaagcggctgatcaaggcgatgaatctggatgacaagcagtggccggcgcgt
caggcgatgtggtacatcaacggcaagaaagatgatggcctgcgcccgcagcacattgag
agctacggcaatccggtggagcagacctggctgcgcgtctatcaggcgtaccaggaggcg
tgcgaccgcgccgggctggtggacttcgccgaactgctgctgcgcgcccatgagctgtgg
ctcaacaagccgcacatcctgaaccactaccgcgaccgcttcaccaacattctggtggat
gagttccaggataccaaccgcatccagtacgcttggatccgcctgctggcgggcgatcag
gccaacgtgatgatcgtcggtgacgatgaccagtcgatctacggctggcgcggcgcgcag
gtggagaacatccagcgcttcctccaggatttcccgaaagcggagaccatccgcctcgag
cagaactaccgctccaccagcaatatcctgtcggcggccaacgccctgatcgccaacaac
aatggccgcatgggcaaaaacctctggacggaggatgccgagggcgagcgcatctcgctc
tactgcgccttcaatgagctggatgagtcgcgctttgtggtcaaccgcatcaagacctgg
caggagaacggcggcgcgctgaatgattgcgccatcctctaccgcagcaacgcccagtcg
cgcgtgctggaagaggcgctgttgcaggtgtcgatgccctaccgcatctacggtgggatg
cgcttcttcgaacggcaggagatcaaggactcgctggcctatctgcgcctgatcgccaac
cgcaacgatgacgccgcctttgagcgcgtggtcaacacgccgacgcgcggcattggcgac
cgcaccattgacgtggtgcgccagaccgcgcgggagcgccaactgacgctgtggcaatcc
tgccgcctgttgttgcaggagaaggcgctggcgggccgtgccgcctcgtcgctgcaacgc
ttccttgagctggtggatgcgctggcgcatgagactagcgagatgccgctgcatgtgcag
gctgaccgggtgatcaaggactccggcctgtggatgatgtatgagcaggagaaaggcgag
aaggggcaggcgcgcatcgaaaacttggaggagctggtcaacgccacccggcagtacagc
taccaggatgaggatgaggatttaatgccgttgcaggcgttcctctcccacgccgcgctt
gaggcgggcgaggggcaggcggacgcctatcaggacgcggtacagctgatgaccctccac
tccgccaaggggctggagttccggcaggtgttcattgtcggcatggaggaggggatgttc
cccagccagatggcgctcgacgagggcggccggctggaggaggagcgtcggctggcctac
gtcggcgtgacgcgcgcgatgcagaagctgaccctgacctacgccgagacgcgccgcctg
tatggcaaagaggtgttccaccggccgtcgcgtttcatcgccgaactgccggagaactgc
gtggaggaggtgcggctgcgcgccagcgtctcccgcccggtcaatacccgccgcatgggc
gcgccggtggcgcagagcgacagcggctacagcctcggccagcgcgtacgccacccgaaa
tttggcgagggcaccatcatcaacctcgagggcagcggcgaccacagccgtttgcagatc
gctttcaatggcgaaggggtgaagtggctggtggcggcctacgcccggctcgagacagtc
taa
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