Nissabacter sp. SGAir0207: C1N62_16610
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Entry
C1N62_16610 CDS
T09781
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
nig
Nissabacter sp. SGAir0207
Pathway
nig03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C1N62_16610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nig03019
]
C1N62_16610
Enzymes [BR:
nig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
C1N62_16610
Messenger RNA biogenesis [BR:
nig03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C1N62_16610
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CCDC138_C
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QCR37573
LinkDB
All DBs
Position
3717673..3718965
Genome browser
AA seq
430 aa
AA seq
DB search
MSKTHLTEQKFADFALHPLVIEALENKGFHNCTPIQALALPITVSGRDVAGQAQTGTGKT
LAFLASTFHYLLSHPADANRQINQPRALIMAPTRELAVQIHADAEALSQTTGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMFDLGFIKDIR
WLFRRMPPAAQRLNMLFSATLSYRVKELAFEHMNNAESIEVEPEQKTGHRIKEELFYPSN
EEKMRLLQTLLEEEWPDRCIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILE
DFTQGNLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA
CEEYALNLPAIEAYTGHSIPVSKYNSDALLNELPPPKRLARTRTGSGPRRNSSAPRRNSG
APRTNRKRSG
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacacttaaccgaacagaagtttgccgacttcgccctgcaccctctcgtt
attgaagctcttgaaaataaagggtttcataactgcacgcctattcaggcattagccctg
ccgatcacggtctccggacgggatgtggcgggccaggcgcaaaccggtaccggcaagacg
ctggcgtttctggcgtccactttccactatttactctcccaccctgctgacgccaaccgc
caaatcaaccagccgcgcgcgctgatcatggcgccaacccgcgagctggccgtgcagatc
catgccgacgcggaagcgctgtcacagacgaccggcctgaaactcggcctggcctacggc
ggtgacggttacgacaaacagcttaaagtgctggagagcggcgttgatatcctgatcggc
accactggccgtctgattgactacgccaagcagaaccacattaacctgggcgctatccag
gtagtggtgctggatgaagccgaccgcatgttcgatctgggcttcattaaagacatccgc
tggctgttccgccggatgccgccagccgcccagcgcctgaacatgctgttctccgccacc
ctctcctaccgcgtgaaggagctggcgttcgagcacatgaacaatgccgagtccattgag
gtggaaccggagcagaagactggccaccgtattaaggaagagctgttctacccctccaat
gaagagaagatgcgcctgctgcagacgctgctcgaagaggagtggccggatcgctgcatc
attttcgccaacaccaagcaccgctgcgaagacatctggggccacctggctgccgatggc
caccgcgttggcctgctgaccggcgacgtggcgcagaaaaaacgcctgcgcatcctggag
gatttcacccagggcaacctggacatcctggtggcgaccgacgtggcggcccgtggcttg
cacatcccggccgtgacccacgtgttcaactatgacctgccggatgactgcgaagactac
gtgcaccgcattggccgtactggccgtgccggtgccagcggccactccatcagcctggcc
tgtgaagagtacgcgctgaacctgccggcgattgaggcctataccggccacagcatcccg
gtcagcaagtacaacagcgacgcgctgctgaacgagctgccgccgccgaagcgtctggcc
cgcacccgcaccggcagtggcccgcgccgcaatagctccgcgccgcgccgcaacagcggg
gcaccacgcaccaaccgcaaacgttcaggctga
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