Nissabacter sp. SGAir0207: C1N62_17045
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Entry
C1N62_17045 CDS
T09781
Symbol
rfaQ
Name
(GenBank) putative lipopolysaccharide heptosyltransferase III
KO
K02849
lipopolysaccharide heptosyltransferase III [EC:
2.4.99.25
]
Organism
nig
Nissabacter sp. SGAir0207
Pathway
nig00540
Lipopolysaccharide biosynthesis
nig01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nig00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
C1N62_17045 (rfaQ)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
nig01005
]
C1N62_17045 (rfaQ)
Enzymes [BR:
nig01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.25 lipopolysaccharide heptosyltransferase III
C1N62_17045 (rfaQ)
Lipopolysaccharide biosynthesis proteins [BR:
nig01005
]
Core region
C1N62_17045 (rfaQ)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Glyco_transf_4
DDE_Tnp_IS1
Motif
Other DBs
NCBI-ProteinID:
QCR37649
LinkDB
All DBs
Position
3815174..3816250
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AA seq
358 aa
AA seq
DB search
MNNAALLLSQTPVRRILIIKLRHHGDMLLTTPVINTLHDHYPQAEIDVLLYQETRDMLAA
HPFIHAIVSIDRQWKKLGARRHMLKEAGLIRQIRARRYDLVINLADQWRSAVIARLSGAP
LRVGFDFPKRRHPLWRACHNVLASTEGHRTMHTVEQNLSILAPLAIAPLNTQVTMGYTPE
DAATVGRLLAEQQVGERYIVVQPTSRWFFKCWSEEKMAETLRALQADGHRIVLTSGPDAK
EQKMVAQILALCPAPGIVSLSGRLTLPQLAALIDRAMLFIGVDSVPMHMAAALGTPCIAL
FGPSKLTFWRPWQAKGKVIWAGDYGTLPDPDAIDTRTDERYLNLIPTDVVIHTARELL
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacgcggcactcctcctctcccagaccccggtcaggcgcatcctgatcattaag
ctccgtcaccacggtgatatgttgctgaccaccccggtcatcaataccctgcatgaccac
tacccgcaggcggagattgatgtcctgctctatcaggagacgcgcgacatgctggccgcg
cacccgttcatccacgcgatagtgagcattgaccggcagtggaaaaagctgggcgcgcgc
cgacacatgctgaaagaggccggcctgatccgccagatccgcgcgcggcgctatgatctg
gtgatcaacctggcggatcagtggcgcagcgcggtgatcgcccgcctgagtggggcaccg
ttgcgggtgggcttcgacttcccgaagcgccgccatccactctggcgcgcttgccacaac
gtgctggcgtccactgagggccaccggacgatgcacacggtggagcagaacctctccatc
ctcgcgccgctggccatcgcgccgctcaacacgcaggtgacgatgggctacacgccggag
gatgcggcgacagtgggccgcctgctggccgagcaacaggtgggagagaggtacatcgtg
gtgcagcccacctcacgctggttcttcaagtgctggagtgaggagaagatggccgagacg
ctgcgcgcgcttcaggccgatggtcaccgcatcgtgctgacctcggggccagatgccaaa
gagcagaagatggtggcgcagatcctggcgctctgcccggcgcccggcattgtctcgctt
tccggccgcctgacactgccgcagctggcggcgctgattgaccgggcaatgctgtttatc
ggcgtcgactcggtgccgatgcatatggccgcggcgcttggcaccccctgcatcgccctg
ttcggcccctccaaactgaccttctggcggccgtggcaagccaagggcaaggtgatttgg
gccggcgattacggtacgctgcccgacccggacgcgatcgatacccgtaccgatgagcgc
tacctgaaccttattccgacagacgtggtgatccacaccgcgcgggaactgctatga
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