Nissabacter sp. SGAir0207: C1N62_17080
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Entry
C1N62_17080 CDS
T09781
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
nig
Nissabacter sp. SGAir0207
Pathway
nig03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C1N62_17080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nig03400
]
C1N62_17080
Enzymes [BR:
nig01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
C1N62_17080
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
C1N62_17080
DNA repair and recombination proteins [BR:
nig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C1N62_17080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
zf-C2HC_3
Motif
Other DBs
NCBI-ProteinID:
QCR37656
UniProt:
A0A4P8SJW7
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All DBs
Position
complement(3822182..3822991)
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AA seq
269 aa
AA seq
DB search
MPELPEVETSRRGIEPYLAGHTILHAVVRNGRLRWPVSDEIQALSDQPVLSVQRRAKYLL
IELTRGWIIVHLGMSGSLRVLPEESEPGKHDHVDLVMDSGHVLRYTDPRRFGAWLWCEDL
ATSNVLAHLGPEPLDDAFSTDYLFEKSRNKRTLVKPWLMDNKLVVGVGNIYASESLFMAG
IAPDRAAGSLTHSEAALLVTTIKAVLQRSIEQGGTTLRDFLQSDGKPGYFAQELQVYGRA
GEPCRVCGGLIESARHGQRSTFFCPRCQR
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacctgaagttgaaaccagccgccgtggtattgaaccctacctggccggc
cacaccattctccatgccgtggtacgcaacggccgcctgcgctggccggtctccgacgag
atccaggccctcagcgaccaaccggtgctcagcgtgcagcgccgtgccaaatacctgctg
attgagctgacgcgcggctggattatcgtccacctcggcatgtctggcagcctgcgcgtg
ttgccggaagagagcgagccgggcaagcatgaccatgtcgatctggtgatggatagcggc
cacgtgctgcgttacaccgacccacgccgttttggcgcctggctatggtgcgaagatctg
gcgaccagcaatgtgcttgcccacctcgggccagagccgctggacgatgccttctctacc
gattacctgtttgaaaaatcacgcaataagcgtacgttggtcaaaccctggctgatggac
aataaactggtggtgggcgtggggaatatctatgccagcgagtcgttgtttatggcaggc
attgcgccagaccgcgcggcaggttccctgacgcatagcgaagcggcgttgctggtgacc
accattaaggcggtgttgcagcggtcgattgagcaaggtggcaccacgctgcgtgacttc
ctgcaaagcgacggcaagccgggctattttgctcaggagttgcaggtctatggccgcgcc
ggggagccgtgccgggtgtgcggcgggctgattgagtctgcccgccacggccagcgcagc
accttcttctgcccgcgctgccagcgttag
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